RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 DISC1C4P0D8 188 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 ETV2O00321 342 aaPredicted RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 CFIP05156 583 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 HCKP08631 526 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 SSBP1Q04837 148 aaKnown RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 SLC9A3R2Q15599 337 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 FAM74A3Q4VXF1 159 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 ZNF468Q5VIY5 522 aaPredicted RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 LYG2Q86SG7 212 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 ARMC10Q8N2F6 343 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 OR52H1Q8NGJ2 320 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 OR10R2Q8NGX6 335 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 HLA-CQ95604 372 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 LYZL4Q96KX0 146 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 GPN3Q9UHW5 284 aaPredicted RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 TNFSF18Q9UNG2 199 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 MRPS28Q9Y2Q9 187 aaKnown RBP9.53□□□□□ -0.88
VPS52-217ENST00000478934 B3GALT1Q9Y5Z6 326 aa9.53□□□□□ -0.88
VPS52-217ENST00000478934 NPIPB13A6NJU9 1138 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 ZNF726A6NNF4 738 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 NPIPB4C9JG80 1138 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 ZNF878C9JN71 531 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 F5H0A9 414 aaPredicted RBP9.52□□□□□ -0.88
VPS52-217ENST00000478934 SDCBPO00560 298 aaPredicted RBP9.52□□□□□ -0.88
VPS52-217ENST00000478934 ADAP1O75689 374 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 HTR3BO95264 441 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 UMODP07911 640 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 MGMTP16455 207 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 CALCRP30988 508 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 ZNF273Q14593 569 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 PCOLCEQ15113 449 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 SLC25A53Q5H9E4 307 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 CLVS2Q5SYC1 327 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 MRPL14Q6P1L8 145 aaKnown RBP9.52□□□□□ -0.88
VPS52-217ENST00000478934 OR2W3Q7Z3T1 314 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 TMEM185AQ8NFB2 350 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 BPIFCQ8NFQ6 507 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 CLDN23Q96B33 292 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 SHDQ96IW2 340 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 GAREM1Q9H706 876 aa9.52□□□□□ -0.88
VPS52-217ENST00000478934 TMEM14DPA8MWL7 114 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 KRBOX1C9JBD0 128 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 TOX3O15405 576 aaPredicted RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 ZNHIT1O43257 154 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 CRTAPO75718 401 aaPredicted RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 IFNA6P05013 189 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 MELTFP08582 738 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 PGAM2P15259 253 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 RAB6AP20340 208 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 MICBQ29980 383 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 ZNF529Q6P280 563 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 CRIP3Q6Q6R5 217 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 Q7L0L9 218 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 SLC25A42Q86VD7 318 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 TMEM200AQ86VY9 491 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 LHFPL5Q8TAF8 219 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 ELP5Q8TE02 316 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 FOXRED1Q96CU9 486 aaPredicted RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 LRRC46Q96FV0 321 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 ARHGAP5-AS1Q96IT6 56 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 OXGR1Q96P68 337 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 GPER1Q99527 375 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 PROK2Q9HC23 129 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 ZC4H2Q9NQZ6 224 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 RASL12Q9NYN1 266 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 PTRH2Q9Y3E5 179 aaKnown RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 PRRC2CQ9Y520 2896 aaKnown RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 EFSO43281 561 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 BPNT1O95861 308 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 F10P00742 488 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 CD8AP01732 235 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 PNLIPP16233 465 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 SERPINF1P36955 418 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 CASRP41180 1078 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 SLC6A9P48067 706 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 RSPO1Q2MKA7 263 aaPredicted RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 FOXRED2Q8IWF2 684 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 KCNRGQ8N5I3 272 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 OR1S2Q8NGQ3 325 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 OR4K15Q8NH41 348 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 OR6X1Q8NH79 312 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 IFI44Q8TCB0 444 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 SLC22A8Q8TCC7 542 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 MR1Q95460 341 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 BARX1Q9HBU1 254 aaPredicted RBP9.52□□□□□ -0.89
VPS52-217ENST00000478934 FANCFQ9NPI8 374 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 ASF1BQ9NVP2 202 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 ZNF581Q9P0T4 197 aa9.52□□□□□ -0.89
VPS52-217ENST00000478934 IGLV3-32A0A0A0MS00 114 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 A0A0B4J2A0 478 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 AQP7P3A6NL99 342 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 CDC14BO60729 498 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 ICAM2P13598 275 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 FAHP16930 419 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 MSX1P28360 303 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 RAET1LQ5VY80 246 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 TMEM88Q6PEY1 159 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 TFAP2EQ6VUC0 442 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms