RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CLDN6P56747 220 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CLDN12P56749 244 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CKS1BP61024 79 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 RPS15AP62244 130 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 RPS13P62277 151 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 PPP3R1P63098 170 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 BTN3A2P78410 334 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 ID2Q02363 134 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 MFGE8Q08431 387 aaPredicted RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 TWF1Q12792 350 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 GAGE5Q13069 117 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 GAGE6Q13070 117 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 MFAP5Q13361 173 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 KIR2DS3Q14952 304 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 KIR2DS1Q14954 304 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 C16orf72Q14CZ0 275 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 EXOSC7Q15024 291 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 SURF2Q15527 256 aaPredicted RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 TRIP6Q15654 476 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 HIST3H3Q16695 136 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 UPP1Q16831 310 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 LRRC26Q2I0M4 334 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 SNAI3Q3KNW1 292 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 ANXA2RQ3ZCQ2 193 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 TMEM128Q5BJH2 165 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 AWAT2Q6E213 333 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 TEX261Q6UWH6 196 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 GSG1LQ6UXU4 331 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 RAD9BQ6WBX8 426 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 RNF165Q6ZSG1 346 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 Q6ZSR9 355 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 SLC25A48Q6ZT89 311 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 C6orf120Q7Z4R8 191 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 FAM19A5Q7Z5A7 132 aaPredicted RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 FAM19A1Q7Z5A9 133 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 ANKRD37Q7Z713 158 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 AMIGO1Q86WK6 493 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 BAP18Q8IXM2 172 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CPNE9Q8IYJ1 553 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 DND1Q8IYX4 353 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CA13Q8N1Q1 262 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 SMIM20Q8N5G0 67 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 PARP16Q8N5Y8 322 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 PACRGLQ8N7B6 248 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 OR4M2Q8NGB6 313 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 OR13J1Q8NGT2 312 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 OR56B4Q8NH76 319 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 PLPPR1Q8TBJ4 325 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 SPPL2BQ8TCT7 592 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 HAVCR2Q8TDQ0 301 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 ORAOV1Q8WV07 137 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CCDC107Q8WV48 283 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 EEF1AKMT1Q8WVE0 214 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 TNFAIP8L1Q8WVP5 186 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 OR5P2Q8WZ92 322 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 BADQ92934 168 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 RPL36ALQ969Q0 106 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 RPUSD4Q96CM3 377 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CMBLQ96DG6 245 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 IMP4Q96G21 291 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 MRAP2Q96G30 205 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CXorf58Q96LI9 332 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 ZNF354BQ96LW1 612 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 COL21A1Q96P44 957 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 GPR78Q96P69 363 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 OR6C1Q96RD1 312 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 NODALQ96S42 347 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 ABHD14AQ9BUJ0 271 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 FUNDC2Q9BWH2 189 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CADM1Q9BY67 442 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CHST5Q9GZS9 411 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 NXF5Q9H1B4 397 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 SEMA6AQ9H2E6 1030 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 NMRAL1Q9HBL8 299 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 ZBTB20Q9HC78 741 aaPredicted RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 POLD4Q9HCU8 107 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 SPHK2Q9NRA0 654 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 MCUBQ9NWR8 336 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 SPANXCQ9NY87 97 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 KLRF1Q9NZS2 232 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 CALML5Q9NZT1 146 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 ARMCX1Q9P291 453 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 GNG8Q9UK08 70 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 STUB1Q9UNE7 303 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 BAIAP2Q9UQB8 552 aa3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 YARS2Q9Y2Z4 477 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 LSM4Q9Y4Z0 139 aaKnown RBP3.03□□□□□ -1.92
FNDC3B-209ENST00000478016 C10orf71Q711Q0 1435 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 TIAM2Q8IVF5 1701 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 SCN7AQ01118 1682 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 GLYATL1P3A0A0U1RQE8 302 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 A0A1B0GU03 582 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 TINCRA0A1B0GVN0 87 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 ANKRD20A5PA0PJZ0 165 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 ISPDA4D126 451 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 LRP5LA4QPB2 252 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 UPK1AO00322 258 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 CASKO14936 926 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 MPZL2O60487 215 aa3.02□□□□□ -1.93
FNDC3B-209ENST00000478016 EIF4E2O60573 245 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms