RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 BTNL3Q6UXE8 466 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 FRA10AC1Q70Z53 315 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 PAGE2Q7Z2X7 111 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 ADAMTSL2Q86TH1 951 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 KLHL7Q8IXQ5 586 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 FGFRL1Q8N441 504 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 MAGEE2Q8TD90 523 aaPredicted RBP3.46□□□□□ -1.86
VPS50-214ENST00000477935 NABP1Q96AH0 204 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 ZHX1-C8orf76Q96EF9 292 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 TNFRSF19Q9NS68 423 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 CES1P1Q9UKY3 287 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 OARD1Q9Y530 152 aa3.46□□□□□ -1.86
VPS50-214ENST00000477935 STARD9Q9P2P6 4700 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 DOCK11Q5JSL3 2073 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 ABCA13Q86UQ4 5058 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 TET2Q6N021 2002 aaPredicted RBP3.45□□□□□ -1.86
VPS50-214ENST00000477935 IGHV3-15A0A0B4J1V0 119 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 IGHV1-69-2A0A0G2JMI3 117 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 SDR42E2A6NKP2 422 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 TRIM49D1C9J1S8 452 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 H0YL77 283 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 PHOX2AO14813 284 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 EFNA2O43921 213 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 GMFGO60234 142 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 MGRN1O60291 552 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 SH3BGRLO75368 114 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 SEMA3DO95025 777 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 TGDSO95455 350 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 OR12D1P0DN82 309 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 HPGDP15428 266 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 UQCRC2P22695 453 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 CALCRP30988 508 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 LCN1P31025 176 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 CD80P33681 288 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 MARCKSL1P49006 195 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 GSK3BP49841 420 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 CDKN2DP55273 166 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 GPX6P59796 221 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 LCP2Q13094 533 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 SELENBP1Q13228 472 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 PLECQ15149 4684 aaKnown RBP3.45□□□□□ -1.86
VPS50-214ENST00000477935 MOGQ16653 247 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 TTMPQ5BVD1 217 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 GPR157Q5UAW9 335 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 SULT1C3Q6IMI6 304 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 APOOLQ6UXV4 268 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 NPSR1Q6W5P4 371 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 TMPPEQ6ZT21 453 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 CCDC36Q8IYA8 594 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 C1orf174Q8IYL3 243 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 SPICQ8N5J4 248 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 TMEM99Q8N816 258 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 SDR9C7Q8NEX9 313 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 OR52E4Q8NGH9 312 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 OR4Q3Q8NH05 313 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 PIGXQ8TBF5 258 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 MRPL37Q9BZE1 423 aaKnown RBP3.45□□□□□ -1.86
VPS50-214ENST00000477935 SHCBP1LQ9BZQ2 653 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 COQ10BQ9H8M1 238 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 C20orf96Q9NUD7 363 aaPredicted RBP3.45□□□□□ -1.86
VPS50-214ENST00000477935 ANO10Q9NW15 660 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 UBAP1Q9NZ09 502 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 OR5V1Q9UGF6 321 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 UBQLN2Q9UHD9 624 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 ZNF107Q9UII5 783 aaPredicted RBP3.45□□□□□ -1.86
VPS50-214ENST00000477935 SLC9A8Q9Y2E8 581 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 USH1CQ9Y6N9 552 aa3.45□□□□□ -1.86
VPS50-214ENST00000477935 DSPPQ9NZW4 1301 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 IGHV2OR16-5A0A0B4J2B6 119 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 IGHV3-16A0A0C4DH30 117 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 MDFIC2A0A1B0GVS7 189 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 ZNF716A6NP11 495 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 H0YIV9 168 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 SULT2B1O00204 365 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 TAPBPO15533 448 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 UTS2O95399 124 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 IGLL1P15814 213 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 MPIP34949 423 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 ALDH3B1P43353 468 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 KIR2DS4P43632 304 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 IER3P46695 156 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 SH3BGRP55822 239 aaPredicted RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 SLC35A2P78381 396 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 SNTB2Q13425 540 aaKnown RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 DDX39BQ13838 428 aaKnown RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 TGFBIQ15582 683 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 MEP1BQ16820 701 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 HIKESHIQ53FT3 197 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 HSP90AA5PQ58FG0 334 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 TEX35Q5T0J7 233 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 C9orf135Q5VTT2 229 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 LIPJQ5W064 366 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 CLEC6AQ6EIG7 209 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 RBM43Q6ZSC3 357 aaKnown RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 PIWIL3Q7Z3Z3 882 aaKnown RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 MTERF4Q7Z6M4 381 aaKnown RBP3.44□□□□□ -1.86
VPS50-214ENST00000477935 ANKRD46Q86W74 232 aa3.44□□□□□ -1.86
VPS50-214ENST00000477935 NDUFA11Q86Y39 141 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms