RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ACBD7Q8N6N7 88 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 NANOGP1Q8N7R0 232 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 LINC01356Q8N9X3 169 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 OR2Z1Q8NG97 314 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 OR6K6Q8NGW6 343 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 HAVCR1Q96D42 359 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 DGCR14Q96DF8 476 aaKnown RBP7.02□□□□□ -1.29
HDAC6-221ENST00000477561 ELMOD3Q96FG2 381 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 COG8Q96MW5 612 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 DCLRE1CQ96SD1 692 aaKnown RBP7.02□□□□□ -1.29
HDAC6-221ENST00000477561 MNTQ99583 582 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 HCAR1Q9BXC0 346 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 SHARPINQ9H0F6 387 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 PNRC2Q9NPJ4 139 aaKnown RBP7.02□□□□□ -1.29
HDAC6-221ENST00000477561 CYSLTR2Q9NS75 346 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 DCAF16Q9NXF7 216 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 N6AMT1Q9Y5N5 214 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 JMJD1CQ15652 2540 aa7.02□□□□□ -1.29
HDAC6-221ENST00000477561 IGHV3-64DA0A0J9YX35 117 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 DAPL1A0PJW8 107 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 FAM157AC9JC47 383 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 CLDN25C9JDP6 229 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 H0YL77 283 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 H3BSA7 217 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF701M0R085 212 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF593O00488 134 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-221ENST00000477561 INMTO95050 263 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 LCATP04180 440 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ACSM4P0C7M7 580 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 OR2T7P0C7T2 308 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 KITLGP21583 273 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 TUBG1P23258 451 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ANOS1P23352 680 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 LIPAP38571 399 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 RGS6P49758 472 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 WNT4P56705 351 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 TIGD6Q17RP2 521 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 CR1LQ2VPA4 569 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 DCXRQ7Z4W1 244 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 CLVS1Q8IUQ0 354 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-221ENST00000477561 BHLHE23Q8NDY6 225 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 OR10H4Q8NGA5 316 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 OR10AD1Q8NGE0 317 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 OR5L1Q8NGL2 311 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 OR10S1Q8NGN2 331 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 OR2T27Q8NH04 317 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 OR52N1Q8NH53 320 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF420Q8TAQ5 688 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-221ENST00000477561 HPS1Q92902 700 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 APOBEC3DQ96AK3 386 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-221ENST00000477561 TMIGD2Q96BF3 282 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ZMYND19Q96E35 227 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-221ENST00000477561 MDFIQ99750 246 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ATF6BQ99941 703 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 BCL7BQ9BQE9 202 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 EGLN1Q9GZT9 426 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ADGRL4Q9HBW9 690 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ISYNA1Q9NPH2 558 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 TUBG2Q9NRH3 451 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 CENPMQ9NSP4 180 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ERVK13-1Q9NX77 482 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 RSL24D1Q9UHA3 163 aaKnown RBP7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ATPIF1Q9UII2 106 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 CDC42EP3Q9UKI2 254 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ZDHHC8Q9ULC8 765 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 CAB39Q9Y376 341 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-221ENST00000477561 WIPI2Q9Y4P8 454 aa7.01□□□□□ -1.29
HDAC6-221ENST00000477561 ISPDA4D126 451 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 C5orf63A6NC05 138 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 B4DSR2 109 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF670-ZNF695F2Z2N8 137 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 J3QRE1 110 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 M0R135 149 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 PHYHO14832 338 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 APOL3O95236 402 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 CD55P08174 381 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 MRPL3P09001 348 aaKnown RBP7□□□□□ -1.29
HDAC6-221ENST00000477561 FAM157CP0CG43 387 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 HSMCR30P0CW71 290 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 RAC2P15153 192 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 TNFSF4P23510 183 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 SLC6A9P48067 706 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ENTPD1P49961 510 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ETV1P50549 477 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 PRKXP51817 358 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 TMBIM6P55061 237 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 GP2P55259 537 aaKnown RBP7□□□□□ -1.29
HDAC6-221ENST00000477561 TPTEP56180 551 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 LMO4P61968 165 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ACTA2P62736 377 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ACTG2P63267 376 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ECH1Q13011 328 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 MLLT11Q13015 90 aaPredicted RBP7□□□□□ -1.29
HDAC6-221ENST00000477561 GALEQ14376 348 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 GK2Q14410 553 aaPredicted RBP7□□□□□ -1.29
HDAC6-221ENST00000477561 SPHARQ15513 63 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 TAF13Q15543 124 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 KRTAP27-1Q3LI81 207 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 TIMM50Q3ZCQ8 353 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ZMAT1Q5H9K5 638 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms