RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 BCDIN3DQ7Z5W3 292 aaKnown RBP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 FOXRED2Q8IWF2 684 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 IQCF1Q8N6M8 205 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF321PQ8N8H1 164 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SLC26A10Q8NG04 563 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 GPR32P1Q8NGA4 272 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 OR10H4Q8NGA5 316 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 OR52E1Q8NGJ3 308 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 OR5L2Q8NGL0 311 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 OR9A1PQ8NGU1 263 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 OR1P1Q8NH06 330 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SFXN5Q8TD22 340 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 GRHL3Q8TE85 626 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 NPRL2Q8WTW4 380 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SLC25A43Q8WUT9 341 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SLC38A5Q8WUX1 472 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SECTM1Q8WVN6 248 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SMPDL3BQ92485 455 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 NTNG2Q96CW9 530 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 RBMXL1Q96E39 390 aaKnown RBP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 CPNE2Q96FN4 548 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 HMCESQ96FZ2 354 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 PCED1BQ96HM7 432 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 BOD1Q96IK1 185 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SLC41A2Q96JW4 573 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 C4orf36Q96KX1 117 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 C2orf50Q96LR7 162 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 IP6K3Q96PC2 410 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 TGM7Q96PF1 710 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 CNN2Q99439 309 aaKnown RBP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 ZFYVE21Q9BQ24 234 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 NUDT16L1Q9BRJ7 211 aaKnown RBP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 BOCQ9BWV1 1114 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 VN1R3Q9BXE9 311 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SLC5A7Q9GZV3 580 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 EIF5A2Q9GZV4 153 aaKnown RBP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM231Q9H6L2 316 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SYNPO2LQ9H987 977 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 ADGRL4Q9HBW9 690 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 PDE7BQ9NP56 450 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 MRPL15Q9P015 296 aaKnown RBP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 IL17CQ9P0M4 197 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 RHCGQ9UBD6 479 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 OR5V1Q9UGF6 321 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 STEAP1Q9UHE8 339 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 IL17BQ9UHF5 180 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SLC7A11Q9UPY5 501 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 KCNK6Q9Y257 313 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF337Q9Y3M9 751 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 CLDN16Q9Y5I7 305 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 CSAG2Q9Y5P2 127 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 PUS1Q9Y606 427 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTCD3-212ENST00000477520 SCN8AQ9UQD0 1980 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 CHD7Q9P2D1 2997 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 PTPRDP23468 1912 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 NCOR1O75376 2440 aa4.19□□□□□ -1.74
PTCD3-212ENST00000477520 A0A087WUU8 490 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 C5orf51A6NDU8 294 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 A6NIN4 97 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 RIIAD1A6NNX1 92 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 CEACAM18A8MTB9 384 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF736B4DX44 427 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 ANKRD66B4E2M5 251 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 HHLA1C9JL84 531 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 K7ERU9 68 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 YY2O15391 372 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 LRP3O75074 770 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TNFSF13O75888 250 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 KAT7O95251 611 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TOMM40O96008 361 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 PNPP00491 289 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 BCHEP06276 602 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 UMODP07911 640 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 IL6RP08887 468 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 HNRNPA1P09651 372 aaKnown RBP eCLIP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TRGC1P0CF51 173 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 EPORP19235 508 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 RPS4Y1P22090 263 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 PYCR1P32322 319 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 GALNSP34059 522 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TAGLN2P37802 199 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 AQP2P41181 271 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 FRKP42685 505 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 LPAR6P43657 344 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 KHKP50053 298 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 NPY4RP50391 375 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 POLR2HP52434 150 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 PTTG1IPP53801 180 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 UBE2KP61086 200 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TRA2BP62995 288 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 PAFAH1B2P68402 229 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 MEF2AQ02078 507 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 LTBQ06643 244 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF750Q32MQ0 723 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 MORN2Q502X0 79 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 MPPE1Q53F39 396 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM128Q5BJH2 165 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 C1orf189Q5VU69 101 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 CYB5R2Q6BCY4 276 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM64Q6YI46 380 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms