RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RAB38P57729 211 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 MIDNQ504T8 468 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 RD3Q7Z3Z2 195 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 OR4D6Q8NGJ1 314 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 OR51F2Q8NH61 342 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 RHBDD1Q8TEB9 315 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 ROBO4Q8WZ75 1007 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 NKD1Q969G9 470 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 ANKRD9Q96BM1 317 aaPredicted RBP13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 OR2M4Q96R27 311 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 SCRT1Q9BWW7 348 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 SLC35B3Q9H1N7 401 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 C5orf66Q9H5L9 145 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 KCNJ16Q9NPI9 418 aa13.58□□□□□ -0.24
CLSTN1-205ENST00000477264 K7EPK0 472 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 HLA-DQA2P01906 255 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 PMP2P02689 132 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 CHRM2P08172 466 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 RPL12P30050 165 aaKnown RBP13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 SLC26A5P58743 744 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 S100A10P60903 97 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 PKIAP61925 76 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 RAP1AP62834 184 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 CLINT1Q14677 625 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 TGIF1Q15583 401 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 SLC9A3R2Q15599 337 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 FAM189A2Q15884 450 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 HYAL4Q2M3T9 481 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 Q6ZSR6 202 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 BEND4Q6ZU67 534 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 CA13Q8N1Q1 262 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 SLC22A24Q8N4F4 322 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 FAM71E2Q8N5Q1 922 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 FAM160A2Q8N612 972 aaPredicted RBP13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 OR52N5Q8NH56 324 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 RERGQ96A58 199 aaPredicted RBP13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 C8orf44Q96CB5 159 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 CNTNAP3Q9BZ76 1288 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 NRSN2Q9GZP1 204 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 PLEKHA2Q9HB19 425 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 CAPN10Q9HC96 672 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 TMEM74BQ9NUR3 256 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 FBXL17Q9UF56 701 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 SIT1Q9Y3P8 196 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 LRP12Q9Y561 859 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 COL6A3P12111 3177 aa13.57□□□□□ -0.24
CLSTN1-205ENST00000477264 IGHV1OR15-9A0A0B4J2B8 117 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 TSTD3H0UI37 97 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 RPL36A-HNRNPH2H7BZ11 118 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 TNFRSF10CO14798 259 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 SRSF10O75494 262 aaKnown RBP13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 OR2C1O95371 312 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 SPARCP09486 303 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 DANCRP0C864 163 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 THBS4P35443 961 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 QRFPP83859 136 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 CLDN23Q96B33 292 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 GALNT14Q96FL9 552 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 NKX3-1Q99801 234 aaPredicted RBP13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 PRDM13Q9H4Q3 707 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 UNKLQ9H9P5 680 aaKnown RBP13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 UBQLN4Q9NRR5 601 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 FAM86C1Q9NVL1 165 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 DCAF16Q9NXF7 216 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 B9D1Q9UPM9 204 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 CPAMD8Q8IZJ3 1885 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 A0A1W2PPE2 198 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 RPS23P62266 143 aaKnown RBP13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 SURF2Q15527 256 aaPredicted RBP13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 ANKRD55Q3KP44 614 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 SLC35D2Q76EJ3 337 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 BHLHE23Q8NDY6 225 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 OR4N2Q8NGD1 307 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 OR13D1Q8NGV5 346 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 OR1E3Q8WZA6 343 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 TSACCQ96A04 125 aaPredicted RBP13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 OR10C1Q96KK4 312 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 SPSB2Q99619 263 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 ZFYVE21Q9BQ24 234 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 EIF5A2Q9GZV4 153 aaKnown RBP13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 TWSG1Q9GZX9 223 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 RAB33BQ9H082 229 aa13.56□□□□□ -0.24
CLSTN1-205ENST00000477264 C10orf142B7Z368 130 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 RD3LP0DJH9 198 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 FCGR2CP31995 323 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 SPCS3P61009 180 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 SUPT4H1P63272 117 aaKnown RBP13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 UNC119Q13432 240 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 SLC22A6Q4U2R8 563 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 NPSR1Q6W5P4 371 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 MED25Q71SY5 747 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 LRRC18Q8N456 261 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF615Q8N8J6 731 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF610Q8N9Z0 462 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 OR13H1Q8NG92 308 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 FLVCR1-AS1Q8TAF5 88 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 MAFIPQ8WZ33 124 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 S100PBPQ96BU1 408 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms