RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	OR51G2	Q8NGK0	314 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	TRUB1	Q8WWH5	349 aa	Known RBP	11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	TMEM186	Q96B77	213 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	TIMD4	Q96H15	378 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	PGAM5	Q96HS1	289 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	CNN2	Q99439	309 aa	Known RBP	11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	MDFI	Q99750	246 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	BEX2	Q9BXY8	128 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	OR10A2	Q9H208	303 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	MMP26	Q9NRE1	261 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	UFSP2	Q9NUQ7	469 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	CLN6	Q9NWW5	311 aa		11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544	WARS2	Q9UGM6	360 aa	Known RBP	11.45	□□□□□ -0.58
RAB5A-208	ENST00000476544		A0A1B0GTI1	187 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	TMEM269	A0A1B0GVZ9	245 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	ACOD1	A6NK06	481 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544		F5H0A9	414 aa	Predicted RBP	11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	TRAPPC2L	H3BP13	241 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	ZNF254	O75437	659 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	FCN3	O75636	299 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	FSTL3	O95633	263 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	LHB	P01229	141 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	PSMA6	P60900	246 aa	Known RBP	11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	CXCR4	P61073	352 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	ZNF85	Q03923	595 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	TMEM155	Q4W5P6	130 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	LYPD2	Q6UXB3	125 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	PLEKHG7	Q6ZR37	379 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	ZBTB49	Q6ZSB9	765 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	C10orf67	Q8IYJ2	551 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	RHOXF1	Q8NHV9	184 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	ASB17	Q8WXJ9	295 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	TMEM246	Q9BRR3	403 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	PBOV1	Q9GZY1	135 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	SLC22A4	Q9H015	551 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	METTL17	Q9H7H0	456 aa	Predicted RBP	11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	NIPAL2	Q9H841	368 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	PATZ1	Q9HBE1	687 aa	Known RBP	11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	FAM118A	Q9NWS6	357 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	UBAP1	Q9NZ09	502 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	OPN4	Q9UHM6	478 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	ENOPH1	Q9UHY7	261 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	CDC42EP3	Q9UKI2	254 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	COL6A5	A8TX70	2615 aa		11.44	□□□□□ -0.58
RAB5A-208	ENST00000476544	CEACAM18	A8MTB9	384 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	BAG2	O95816	211 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	CST4	P01036	141 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	TTR	P02766	147 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	GRP	P07492	148 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	FAM157C	P0CG43	387 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	ELF3	P78545	371 aa	Predicted RBP	11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	PAX2	Q02962	417 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	OCLN	Q16625	522 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	TIGD6	Q17RP2	521 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	FAM76B	Q5HYJ3	339 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	DMRTC1	Q5HYR2	192 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	LCN1P1	Q5VSP4	162 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	KCTD18	Q6PI47	426 aa	Predicted RBP	11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	ZNF841	Q6ZN19	808 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544		Q6ZSR3	168 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	GID4	Q8IVV7	300 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	PLPP7	Q8NBV4	271 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	FAM81A	Q8TBF8	368 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	OR51E1	Q8TCB6	317 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	ERGIC1	Q969X5	290 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	TBX5	Q99593	518 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	GAL3ST1	Q99999	423 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	ZNF649	Q9BS31	505 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	TMPRSS13	Q9BYE2	586 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	MRO	Q9BYG7	248 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	PRRG3	Q9BZD7	231 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	RGCC	Q9H4X1	137 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	OPA3	Q9H6K4	179 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	SP140L	Q9H930	580 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	SLC22A13	Q9Y226	551 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	TMEM14A	Q9Y6G1	99 aa		11.43	□□□□□ -0.58
RAB5A-208	ENST00000476544	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544		A0A0U1RQV5	110 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	ISPD	A4D126	451 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	IFNL4	K9M1U5	179 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	OR2T7	P0C7T2	308 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	THBS2	P35442	1172 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	MDH2	P40926	338 aa	Known RBP	11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	ISL1	P61371	349 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	LCN2	P80188	198 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	TMED1	Q13445	227 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	GFOD2	Q3B7J2	385 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	LIPN	Q5VXI9	398 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	PEG10	Q86TG7	708 aa	Known RBP	11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	KLB	Q86Z14	1044 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	ENTHD1	Q8IYW4	607 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	GALNT4	Q8N4A0	578 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	GCSAM	Q8N6F7	178 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	SPERT	Q8NA61	448 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	DEFB108B	Q8NET1	73 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	OR2T27	Q8NH04	317 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	OR51F2	Q8NH61	342 aa		11.42	□□□□□ -0.58
RAB5A-208	ENST00000476544	OR5P3	Q8WZ94	311 aa		11.42	□□□□□ -0.58

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