RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ONECUT2O95948 504 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 CD2P06729 351 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 CHRM2P08172 466 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ADCYAP1P18509 176 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 PGCP20142 388 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 MAOAP21397 527 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ABCD3P28288 659 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 CASRP41180 1078 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 TSPAN7P41732 249 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 CX3CR1P49238 355 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 HOXA1P49639 335 aaPredicted RBP6.07□□□□□ -1.44
UBR4-212ENST00000475973 ZNF84P51523 738 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 POLR2HP52434 150 aaKnown RBP6.07□□□□□ -1.44
UBR4-212ENST00000475973 UCP2P55851 309 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 SUMO3P55854 103 aaPredicted RBP6.07□□□□□ -1.44
UBR4-212ENST00000475973 RAP1BP61224 184 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 LCN6P62502 163 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 RAP1AP62834 184 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 OC90Q02509 493 aaPredicted RBP6.07□□□□□ -1.44
UBR4-212ENST00000475973 SNTB1Q13884 538 aaKnown RBP6.07□□□□□ -1.44
UBR4-212ENST00000475973 GUCA2BQ16661 112 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 DCAF12Q5T6F0 453 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ELP2Q6IA86 826 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 C3orf33Q6P1S2 294 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 TMEM71Q6P5X7 295 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 TMEM17Q86X19 198 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 MISPQ8IVT2 679 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 WDFY1Q8IWB7 410 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 C9orf40Q8IXQ3 194 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 BEST3Q8N1M1 668 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 BPIFB2Q8N4F0 458 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 BPIFCQ8NFQ6 507 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 OR4D6Q8NGJ1 314 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 OR51A2Q8NGJ7 313 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 OR1J2Q8NGS2 313 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 OR10K1Q8NGX5 313 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 MFSD8Q8NHS3 518 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 NUBPLQ8TB37 319 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 PHOSPHO1Q8TCT1 267 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 PPP1R1CQ8WVI7 109 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 TNFAIP8L1Q8WVP5 186 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 DACT3Q96B18 629 aaPredicted RBP6.07□□□□□ -1.44
UBR4-212ENST00000475973 SLC25A44Q96H78 314 aaPredicted RBP6.07□□□□□ -1.44
UBR4-212ENST00000475973 AQP10Q96PS8 301 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ZPBPQ9BS86 351 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ULBP3Q9BZM4 244 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ATG5Q9H1Y0 275 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 KCNK15Q9H427 330 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 EXO5Q9H790 373 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 TAS2R4Q9NYW5 299 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 FOXJ2Q9P0K8 574 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 DNAJB11Q9UBS4 358 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ZNF230Q9UIE0 474 aaPredicted RBP6.07□□□□□ -1.44
UBR4-212ENST00000475973 IKZF2Q9UKS7 526 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 SLC5A6Q9Y289 635 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ZNF175Q9Y473 711 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 OR10H1Q9Y4A9 318 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ZFYVE26Q68DK2 2539 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 ADAMTS20P59510 1910 aa6.07□□□□□ -1.44
UBR4-212ENST00000475973 IGLV3-12A0A075B6K2 115 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 TMED7-TICAM2A0A0A6YYA0 188 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 LOC107986453A0A1B0GWG9 222 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 TLCD2A6NGC4 264 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 FAM74A7A6NL05 159 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 C17orf105B2RV13 164 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 FAM157AC9JC47 383 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 J3QKU1 62 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 SLC16A7O60669 478 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 SLC25A12O75746 678 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 CYB5AP00167 134 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 TTRP02766 147 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 RLN1P04808 185 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 CCL4P13236 92 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 FOLR2P14207 255 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 PLA2G2AP14555 144 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 ZNF17P17021 662 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 HOXB4P17483 251 aaPredicted RBP6.06□□□□□ -1.44
UBR4-212ENST00000475973 CD34P28906 385 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 RPS27P42677 84 aaKnown RBP6.06□□□□□ -1.44
UBR4-212ENST00000475973 P2RY4P51582 365 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 ZNF133P52736 654 aaPredicted RBP6.06□□□□□ -1.44
UBR4-212ENST00000475973 TMEM50BP56557 158 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 SQSTM1Q13501 440 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 PPP1R1AQ13522 171 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 LY6DQ14210 128 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 ERV3-1Q14264 604 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 TGIF1Q15583 401 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 HIST3H3Q16695 136 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 NKPD1Q17RQ9 610 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 FAM74A3Q4VXF1 159 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 C4orf46Q504U0 113 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 C1orf140Q5VVS0 124 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 SHEQ5VZ18 495 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 PAPD4Q6PIY7 484 aaKnown RBP6.06□□□□□ -1.44
UBR4-212ENST00000475973 WDR74Q6RFH5 385 aaPredicted RBP6.06□□□□□ -1.44
UBR4-212ENST00000475973 PCSK4Q6UW60 755 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 CFAP77Q6ZQR2 320 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 VASH2Q86V25 355 aa6.06□□□□□ -1.44
UBR4-212ENST00000475973 ZNF761Q86XN6 746 aaPredicted RBP6.06□□□□□ -1.44
UBR4-212ENST00000475973 PLXDC1Q8IUK5 500 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms