RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CHST5Q9GZS9 411 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 KCNK15Q9H427 330 aa17.2■□□□□ 0.34
SSR1-204ENST00000474597 DMXL2Q8TDJ6 3036 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 CTDSPLO15194 276 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 HOXD4P09016 255 aaPredicted RBP17.19■□□□□ 0.34
SSR1-204ENST00000474597 EDN3P14138 238 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 ZNF92Q03936 586 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 MALLQ13021 153 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 PLA2G7Q13093 441 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 RNASE12Q5GAN4 147 aaKnown RBP17.19■□□□□ 0.34
SSR1-204ENST00000474597 RTL6Q6ICC9 239 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 COLCA1Q6ZS62 124 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 SEM1Q6ZVN7 128 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 POM121L2Q96KW2 1035 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 SPACA5Q96QH8 159 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 ATG5Q9H1Y0 275 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 FAIMQ9NVQ4 179 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 CTAG2O75638 210 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 TNFSF13O75888 250 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 AWAT2Q6E213 333 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 PNLDC1Q8NA58 520 aaKnown RBP17.19■□□□□ 0.34
SSR1-204ENST00000474597 APOBEC3DQ96AK3 386 aaPredicted RBP17.19■□□□□ 0.34
SSR1-204ENST00000474597 SLC22A4Q9H015 551 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 NEK6Q9HC98 313 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 TUBD1Q9UJT1 453 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 FAM215AQ9Y5M1 114 aa17.19■□□□□ 0.34
SSR1-204ENST00000474597 hCG_38984A0A1B0GV85 526 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 PRRG2O14669 202 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 XRCC3O43542 346 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 BPNT1O95861 308 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 HOXB1P14653 301 aaPredicted RBP17.18■□□□□ 0.34
SSR1-204ENST00000474597 GSK3AP49840 483 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 EFNB2P52799 333 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 GABRA6Q16445 453 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 HACD4Q5VWC8 232 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 MZT2BQ6NZ67 158 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 GDPD3Q7L5L3 318 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 ANGPTL5Q86XS5 388 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 ZNF584Q8IVC4 421 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 NPRL2Q8WTW4 380 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 STARD4Q96DR4 205 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 CACNA1GO43497 2377 aa17.18■□□□□ 0.34
SSR1-204ENST00000474597 IGKV1-9A0A0C4DH69 117 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 ALX3O95076 343 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 SERPINA5P05154 406 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 PRF1P14222 555 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 COX5AP20674 150 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 ACKR3P25106 362 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 TIMP3P35625 211 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 TDGF1P3P51864 188 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 TAS2R20P59543 309 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 FAM3AP98173 230 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 UBE2V2Q15819 145 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 TBC1D28Q2M2D7 210 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 LINC00303Q3SY05 128 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 GFRALQ6UXV0 394 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 BEND4Q6ZU67 534 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 ZNF610Q8N9Z0 462 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 C1orf162Q8NEQ5 155 aaPredicted RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 SLC30A7Q8NEW0 376 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 OPN3Q9H1Y3 402 aaPredicted RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 MYEF2Q9P2K5 600 aaKnown RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 INTS1Q8N201 2190 aaKnown RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 C1QTNF9BB2RNN3 333 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 GSTZ1O43708 216 aaPredicted RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 TPPPO94811 219 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 TOXO94900 526 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 C1QTNF9P0C862 333 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 MRPS10P82664 201 aaKnown RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 DGCR2P98153 550 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 CNN3Q15417 329 aaKnown RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 CCBE1Q6UXH8 406 aaPredicted RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 C3P1Q6ZMU1 363 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 MRPL21Q7Z2W9 205 aaKnown RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 ZNF101Q8IZC7 436 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 GABRG1Q8N1C3 465 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 SMIM4Q8WVI0 70 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 SPSB4Q96A44 273 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 PTX4Q96A99 478 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 MS4A3Q96HJ5 214 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 C11orf54Q9H0W9 315 aaPredicted RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 TP63Q9H3D4 680 aaPredicted RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 GPR173Q9NS66 373 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 RAB22AQ9UL26 194 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 MRPS28Q9Y2Q9 187 aaKnown RBP17.17■□□□□ 0.34
SSR1-204ENST00000474597 RHBDD3Q9Y3P4 386 aa17.17■□□□□ 0.34
SSR1-204ENST00000474597 PTPRQQ9UMZ3 2332 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 ANKRD11Q6UB99 2663 aaPredicted RBP17.16■□□□□ 0.34
SSR1-204ENST00000474597 A0A1W2PR80 420 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 PLA2G10O15496 165 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 CD3GP09693 182 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 RAB6AP20340 208 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 MNDAP41218 407 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 PTH2RP49190 550 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 MRPL49Q13405 166 aaKnown RBP17.16■□□□□ 0.34
SSR1-204ENST00000474597 TSC22D1Q15714 1073 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 KISS1Q15726 138 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 CLVS2Q5SYC1 327 aa17.16■□□□□ 0.34
SSR1-204ENST00000474597 KRT74Q7RTS7 529 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms