RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CST6Q15828 149 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 AADACL3Q5VUY0 350 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 POMZP3Q6PJE2 187 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 FAM160A2Q8N612 972 aaPredicted RBP16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 RSC1A1Q92681 617 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 CPNE4Q96A23 557 aaPredicted RBP16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 ANAPC10Q9UM13 185 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 HSD11B1P28845 292 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 IAH1Q2TAA2 248 aaPredicted RBP16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 PLAC9Q5JTB6 97 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 REC114Q7Z4M0 266 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 SLC22A24Q8N4F4 322 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 OR13G1Q8NGZ3 307 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 ST7LQ8TDW4 575 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 ERGIC1Q969X5 290 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 S100A13Q99584 98 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 S1PR5Q9H228 398 aa16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 TMEM184BQ9Y519 407 aaPredicted RBP16.53■□□□□ 0.24
ECHDC1-214ENST00000474289 GMFGO60234 142 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 C1QL1O75973 258 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 NOGQ13253 232 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 CLEC9AQ6UXN8 241 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 SPRED2Q7Z698 418 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 SEMA6DQ8NFY4 1073 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 OR9A4Q8NGU2 314 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 ZNF519Q8TB69 540 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 MUCL1Q96DR8 90 aa16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 NUDT16L1Q9BRJ7 211 aaKnown RBP16.52■□□□□ 0.24
ECHDC1-214ENST00000474289 ARHGEF17Q96PE2 2063 aaPredicted RBP16.52■□□□□ 0.23
ECHDC1-214ENST00000474289 TMEM269A0A1B0GVZ9 245 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 TMEM14DPA8MWL7 114 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 MASP2O00187 686 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 BCAT2O15382 392 aaPredicted RBP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 DEDDO75618 318 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 HPGDP15428 266 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 CAMLGP49069 296 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 TAS2R60P59551 318 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 RPL27P61353 136 aaKnown RBP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 SGCGQ13326 291 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 GAMTQ14353 236 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 C14orf28Q4W4Y0 310 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 C2orf27AQ580R0 203 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 FAM78AQ5JUQ0 283 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 RPUSD3Q6P087 351 aaKnown RBP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF529Q6P280 563 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 SPNS3Q6ZMD2 512 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 LHFPL1Q86WI0 220 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 C19orf47Q8N9M1 422 aaKnown RBP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 SCGB3A2Q96PL1 93 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 PRRX2Q99811 253 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 LPAR5Q9H1C0 372 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 LUZP4Q9P127 313 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 PUS1Q9Y606 427 aaKnown RBP eCLIP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 BGLAPP02818 100 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 DDTP30046 118 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 VITQ6UXI7 678 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 C12orf76Q8N812 135 aaPredicted RBP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 OR5H2Q8NGV7 314 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 CCL4L1Q8NHW4 92 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 ADAT3Q96EY9 351 aaPredicted RBP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 TGM7Q96PF1 710 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 OR2M4Q96R27 311 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 APOOQ9BUR5 198 aa16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 THAP10Q9P2Z0 257 aaPredicted RBP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 ATXN7L1Q9ULK2 861 aaPredicted RBP16.51■□□□□ 0.23
ECHDC1-214ENST00000474289 PRSS38A1L453 326 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 SOCS1O15524 211 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 RAD51DO75771 328 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 GPR3P46089 330 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 SURF2Q15527 256 aaPredicted RBP16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 PCK2Q16822 640 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 PSRC1Q6PGN9 363 aaPredicted RBP16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 RNF144BQ7Z419 303 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF101Q8IZC7 436 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 CCDC54Q8NEL0 328 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 GALNT14Q96FL9 552 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 ARV1Q9H2C2 271 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 UCK1Q9HA47 277 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 C19orf12Q9NSK7 152 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 VSX1Q9NZR4 365 aaPredicted RBP16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 SDCBPO00560 298 aaPredicted RBP16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 HCRTR1O43613 425 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 LINC00346Q8IVM7 164 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 SLC25A36Q96CQ1 311 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 BSCL2Q96G97 398 aaPredicted RBP16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 TCTN2Q96GX1 697 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 RNF208Q9H0X6 261 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 UBQLN4Q9NRR5 601 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 ZDHHC8Q9ULC8 765 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 OSGIN2Q9Y236 505 aa16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 COA3Q9Y2R0 106 aaPredicted RBP16.5■□□□□ 0.23
ECHDC1-214ENST00000474289 MED19A0JLT2 244 aaPredicted RBP16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 FIGNL2A6NMB9 653 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 RAMP1O60894 148 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 F10P00742 488 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 SEC11BP0C7V7 166 aa16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 HIST1H1DP16402 221 aaKnown RBP16.49■□□□□ 0.23
ECHDC1-214ENST00000474289 LMO1P25800 156 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms