RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PGA4P0DJD7 388 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PGA5P0DJD9 388 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CALCBP10092 127 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 LYL1P12980 280 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CR2P20023 1033 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ZBTB25P24278 435 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 AQP2P41181 271 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TNFSF9P41273 254 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PPICP45877 212 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 RND2P52198 227 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 RPS16P62249 146 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 RPS13P62277 151 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 HIST1H3AP68431 136 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 RBPJQ06330 500 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SLAQ13239 276 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GPR18Q14330 331 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TMEM183BQ1AE95 376 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 HIKESHIQ53FT3 197 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 LDLRAD2Q5SZI1 272 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM27D1Q5T7N8 215 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ARL9Q6T311 187 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TMED4Q7Z7H5 227 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 S100A7AQ86SG5 101 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 C17orf64Q86WR6 236 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SUMF2Q8NBJ7 301 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 OR6T1Q8NGN1 323 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TSLPQ969D9 159 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC6A7Q99884 636 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 DPEP2Q9H4A9 486 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TAF9BQ9HBM6 251 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 STEAP1Q9UHE8 339 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CSAG2Q9Y5P2 127 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 J3QRE1 110 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GEMIN2O14893 280 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 NME6O75414 186 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 NDUFS3O75489 264 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 OR6A2O95222 327 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CPSF4O95639 269 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TBX6O95947 436 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CST4P01036 141 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GAPDHP04406 335 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CRYGCP07315 174 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GTF2F2P13984 249 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CXCR1P25024 350 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PSMB10P40306 273 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CX3CR1P49238 355 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 KHKP50053 298 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TAS2R20P59543 309 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PPP2CBP62714 309 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PPP2CAP67775 309 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 DHRS2Q13268 280 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 DUSP5Q16690 384 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 C1orf189Q5VU69 101 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PRR27Q6MZM9 219 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SP8Q8IXZ3 490 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC26A10Q8NG04 563 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 OR4S2Q8NH73 311 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 C11orf40Q8WZ69 217 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SMPDL3BQ92485 455 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 MAL2Q969L2 176 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ARRDC3Q96B67 414 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ANKRD9Q96BM1 317 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 MS4A6EQ96DS6 147 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 JSRP1Q96MG2 331 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 NMES1Q9C002 83 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 FZD8Q9H461 694 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 IL36AQ9UHA7 158 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 NTNG1Q9Y2I2 539 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SIRT4Q9Y6E7 314 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GJE1A6NN92 205 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 FFAR1O14842 300 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 P2RX6O15547 441 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 GLSO94925 669 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 CD37P11049 281 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 CCNOP22674 350 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 DPP4P27487 766 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 RAB28P51157 221 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 TRA2BP62995 288 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 RHOGP84095 191 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM3AP98173 230 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 PRSS8Q16651 343 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC22A6Q4U2R8 563 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 AADACL3Q5VUY0 350 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM71E1Q6IPT2 247 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 STEAP1BQ6NZ63 245 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF343Q6P1L6 599 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 TEX43Q6ZNM6 134 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM220AQ7Z4H9 259 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 CMTM1Q8IZ96 169 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 OR9K2Q8NGE7 335 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ESAMQ96AP7 390 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 MIB2Q96AX9 1013 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 IL17FQ96PD4 163 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 CIB3Q96Q77 187 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 NPY6RQ99463 290 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 KLHDC3Q9BQ90 382 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 PORCNQ9H237 461 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM30AQ9NZY2 134 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 JKAMPQ9P055 326 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 SIX4Q9UIU6 781 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms