RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 ADRA2CP18825 462 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 EPHA1P21709 976 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 ATP6V1E1P36543 226 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 CD200P41217 278 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 RIDAP52758 137 aaKnown RBP9.69□□□□□ -0.86
CPNE1-222ENST00000473373 ACTR3P61158 418 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 SRSF2Q01130 221 aaKnown RBP9.69□□□□□ -0.86
CPNE1-222ENST00000473373 KRTAP24-1Q3LI83 254 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 FAM201AQ5SY85 155 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 SFRP4Q6FHJ7 346 aaPredicted RBP9.69□□□□□ -0.86
CPNE1-222ENST00000473373 FAHD1Q6P587 224 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 PARP8Q8N3A8 854 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 C19orf18Q8NEA5 215 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 CSNK2A3Q8NEV1 391 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 PYDC1Q8WXC3 89 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 UTP4Q969X6 686 aaKnown RBP9.69□□□□□ -0.86
CPNE1-222ENST00000473373 NEIL1Q96FI4 390 aaPredicted RBP9.69□□□□□ -0.86
CPNE1-222ENST00000473373 TECTBQ96PL2 329 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 HIST1H2AAQ96QV6 131 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 SIGLEC11Q96RL6 698 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 IL4I1Q96RQ9 567 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 AMELYQ99218 206 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 CNN2Q99439 309 aaKnown RBP9.69□□□□□ -0.86
CPNE1-222ENST00000473373 NIPAL2Q9H841 368 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 C1orf123Q9NWV4 160 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 LRCH1Q9Y2L9 728 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 LRP12Q9Y561 859 aa9.69□□□□□ -0.86
CPNE1-222ENST00000473373 C5orf63A6NC05 138 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 SLC22A31A6NKX4 558 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 ZNF670-ZNF695F2Z2N8 137 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 M0R129 80 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 PRKYO43930 277 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 FPR2P25090 351 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 CD80P33681 288 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 OPRL1P41146 370 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 HCCSP53701 268 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 SEC61A1P61619 476 aaKnown RBP9.68□□□□□ -0.86
CPNE1-222ENST00000473373 MAB21L1Q13394 359 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 MPPED2Q15777 294 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 ZNF181Q2M3W8 571 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 ZNF829Q3KNS6 432 aaPredicted RBP9.68□□□□□ -0.86
CPNE1-222ENST00000473373 RHOUQ7L0Q8 258 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 THAP5Q7Z6K1 395 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 KLBQ86Z14 1044 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 GID4Q8IVV7 300 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 C10orf67Q8IYJ2 551 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 PIGCQ92535 297 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 CENPNQ96H22 339 aaPredicted RBP9.68□□□□□ -0.86
CPNE1-222ENST00000473373 TEAD3Q99594 435 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 MICU1Q9BPX6 476 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 TMEM246Q9BRR3 403 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 YIPF3Q9GZM5 350 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 RGCCQ9H4X1 137 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 TRIM36Q9NQ86 728 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 G6PC2Q9NQR9 355 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 IMPAD1Q9NX62 359 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 CLN8Q9UBY8 286 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 OAZ3Q9UMX2 235 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 AUP1Q9Y679 476 aa9.68□□□□□ -0.86
CPNE1-222ENST00000473373 TRAV38-1A0A0B4J264 116 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 TMEM269A0A1B0GVZ9 245 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 PHYHO14832 338 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 SLC2A5P22732 501 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 THBS2P35442 1172 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 GATA4P43694 442 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 PITPNBP48739 271 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 GSK3AP49840 483 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 PSMA6P60900 246 aaKnown RBP9.67□□□□□ -0.86
CPNE1-222ENST00000473373 GMFBP60983 142 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 FAM3AP98173 230 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 IL5RAQ01344 420 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 ZNF404Q494X3 552 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 KDM4DQ6B0I6 523 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 RBMS3Q6XE24 437 aaKnown RBP9.67□□□□□ -0.86
CPNE1-222ENST00000473373 DCDC5Q6ZRR9 648 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 MEPCEQ7L2J0 689 aaKnown RBP9.67□□□□□ -0.86
CPNE1-222ENST00000473373 SLC35F2Q8IXU6 374 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 TMEM163Q8TC26 289 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 ASB17Q8WXJ9 295 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 SGK3Q96BR1 496 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 RAB3IPQ96QF0 476 aaPredicted RBP9.67□□□□□ -0.86
CPNE1-222ENST00000473373 JMJD8Q96S16 334 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 TBX5Q99593 518 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 CIB1Q99828 191 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 RBM4BQ9BQ04 359 aaKnown RBP9.67□□□□□ -0.86
CPNE1-222ENST00000473373 RTL8AQ9BWD3 113 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 TMPRSS13Q9BYE2 586 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 GABARAPL1Q9H0R8 117 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 ERVK-18Q9QC07 812 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 KLHDC2Q9Y2U9 406 aa9.67□□□□□ -0.86
CPNE1-222ENST00000473373 hCG_38984A0A1B0GV85 526 aa9.66□□□□□ -0.86
CPNE1-222ENST00000473373 ZAR1LA6NP61 321 aa9.66□□□□□ -0.86
CPNE1-222ENST00000473373 ZNF850A8MQ14 1090 aa9.66□□□□□ -0.86
CPNE1-222ENST00000473373 LOC110117498-PIK3R3F6TDL0 507 aa9.66□□□□□ -0.86
CPNE1-222ENST00000473373 ADAM20O43506 726 aa9.66□□□□□ -0.86
CPNE1-222ENST00000473373 ZFP36P26651 326 aaKnown RBP9.66□□□□□ -0.86
CPNE1-222ENST00000473373 MAP2K3P46734 347 aa9.66□□□□□ -0.86
CPNE1-222ENST00000473373 CDC42P60953 191 aa9.66□□□□□ -0.86
CPNE1-222ENST00000473373 CXCR4P61073 352 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms