RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 SMDT1Q9H4I9 107 aa9□□□□□ -0.97
APTX-216ENST00000472896 TAF9BQ9HBM6 251 aa9□□□□□ -0.97
APTX-216ENST00000472896 RAB18Q9NP72 206 aa9□□□□□ -0.97
APTX-216ENST00000472896 CES1P1Q9UKY3 287 aa9□□□□□ -0.97
APTX-216ENST00000472896 MRPS33Q9Y291 106 aaKnown RBP9□□□□□ -0.97
APTX-216ENST00000472896 OR1A2Q9Y585 309 aa9□□□□□ -0.97
APTX-216ENST00000472896 PCYT1BQ9Y5K3 369 aaPredicted RBP9□□□□□ -0.97
APTX-216ENST00000472896 B3GALT1Q9Y5Z6 326 aa9□□□□□ -0.97
APTX-216ENST00000472896 LRP4O75096 1905 aa9□□□□□ -0.97
APTX-216ENST00000472896 CLDN4O14493 209 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ARPC3O15145 178 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 SYT7O43581 403 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 FCMRO60667 390 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 UPK3AO75631 287 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 YIF1AO95070 293 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 AIFM1O95831 613 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 CSTBP04080 98 aaKnown RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 GAPDHP04406 335 aaKnown RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 NID1P14543 1247 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 PNLIPP16233 465 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 TBPP20226 339 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 MC3RP41968 323 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 SOX2P48431 317 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 RAP1AP62834 184 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 SKP1P63208 163 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 NHLH2Q02577 135 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 RASGEF1BQ0VAM2 473 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 NFATC4Q14934 902 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 SCGB2B2Q4G0G5 96 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 C14orf28Q4W4Y0 310 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 RNASE10Q5GAN6 216 aaKnown RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 TMEM164Q5U3C3 297 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 FAM166AQ6J272 317 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 MFSD12Q6NUT3 480 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 PAPD4Q6PIY7 484 aaKnown RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 DPY19L2P2Q6ZN68 376 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 TAF8Q7Z7C8 310 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ZNF584Q8IVC4 421 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 IL22RA1Q8N6P7 574 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ZNF610Q8N9Z0 462 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 OR10D4PQ8NGN7 298 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 OR4K13Q8NH42 304 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 MCHR2Q969V1 340 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 PTX4Q96A99 478 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ISOC2Q96AB3 205 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 PIGQQ9BRB3 760 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 CST11Q9H112 138 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 UNKLQ9H9P5 680 aaKnown RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 FKRPQ9H9S5 495 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 DOK5Q9P104 306 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 TAC3Q9UHF0 121 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ARHGEF17Q96PE2 2063 aaPredicted RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 TRAV8-7A0A075B6U6 113 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 A0A0A6YYC8 382 aaPredicted RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 IGHV5-10-1A0A0J9YXX1 117 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 A0A1B0GW64 132 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 CXorf65A6NEN9 183 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ZNF891A8MT65 544 aaPredicted RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 ZNF587BE7ETH6 402 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 I3L1I5 382 aaPredicted RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 OR1F1O43749 312 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ALOX12BO75342 701 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 PTBP3O95758 552 aaKnown RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 TNFP01375 233 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 AK4P27144 223 aaPredicted RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 HTR2CP28335 458 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 SNCAP37840 140 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 AKR1C3P42330 323 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 TSFMP43897 325 aaKnown RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 SLC25A1P53007 311 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 FAM3AP98173 230 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 TMEM52BQ4KMG9 183 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 KDM8Q8N371 416 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 AMER3Q8N944 861 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 OR7G2Q8NG99 324 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 RRNAD1Q96FB5 475 aaKnown RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 SLC41A2Q96JW4 573 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 IP6K3Q96PC2 410 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ZNF587Q96SQ5 575 aaPredicted RBP8.99□□□□□ -0.97
APTX-216ENST00000472896 PBDC1Q9BVG4 233 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 SPACA1Q9HBV2 294 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 FRRS1LQ9P0K9 344 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 IER3IP1Q9Y5U9 82 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 ZNF780BQ9Y6R6 833 aa8.99□□□□□ -0.97
APTX-216ENST00000472896 C13orf42A0A1B0GVH6 325 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 A0A1W2PR48 441 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 PRR19A6NJB7 356 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 OR4C45A6NMZ5 311 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 B4DGG1 531 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 H7C1Q1 480 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 PPP1R2P9O14990 202 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 ADAP1O75689 374 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 JTBO76095 146 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 OR2C1O95371 312 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 TSPAN15O95858 294 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 COX5BP10606 129 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 CD37P11049 281 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 GNLYP22749 145 aa8.98□□□□□ -0.97
APTX-216ENST00000472896 RPS10P46783 165 aaKnown RBP8.98□□□□□ -0.97
APTX-216ENST00000472896 PPM1FP49593 454 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms