RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 MROQ9BYG7 248 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 NTN4Q9HB63 628 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 C1orf123Q9NWV4 160 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 CLN8Q9UBY8 286 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 TMEM14AQ9Y6G1 99 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 SVEP1Q4LDE5 3571 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 YLPM1P49750 1951 aaKnown RBP16.3■□□□□ 0.2
COMMD1-208ENST00000472729 COL6A5A8TX70 2615 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 RGS9O75916 674 aaPredicted RBP16.3■□□□□ 0.2
COMMD1-208ENST00000472729 AVPP01185 164 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 PITPNBP48739 271 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 DAPP51397 102 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 SEC61A1P61619 476 aaKnown RBP16.3■□□□□ 0.2
COMMD1-208ENST00000472729 ZNF154Q13106 437 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 MPPED2Q15777 294 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 ZNF404Q494X3 552 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 DCDC5Q6ZRR9 648 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 BBS1Q8NFJ9 593 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 FAM81AQ8TBF8 368 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 DVL3Q92997 716 aaPredicted RBP16.3■□□□□ 0.2
COMMD1-208ENST00000472729 HIST1H2AAQ96QV6 131 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 PAPOLGQ9BWT3 736 aaKnown RBP16.3■□□□□ 0.2
COMMD1-208ENST00000472729 YIPF3Q9GZM5 350 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 MMP26Q9NRE1 261 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 ZNF391Q9UJN7 358 aa16.3■□□□□ 0.2
COMMD1-208ENST00000472729 TRAV38-1A0A0B4J264 116 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 C5orf63A6NC05 138 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 F5H0A9 414 aaPredicted RBP16.29■□□□□ 0.2
COMMD1-208ENST00000472729 PMELP40967 661 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 GSK3AP49840 483 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 ACTR3P61158 418 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 FAM3AP98173 230 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 IL5RAQ01344 420 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 FAM201AQ5SY85 155 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 LRRN1Q6UXK5 716 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 COMMD2Q86X83 199 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 ASB17Q8WXJ9 295 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 AMELYQ99218 206 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 TEAD3Q99594 435 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 MICU1Q9BPX6 476 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 ERVK-18Q9QC07 812 aa16.29■□□□□ 0.2
COMMD1-208ENST00000472729 POLR3KQ9Y2Y1 108 aaPredicted RBP16.29■□□□□ 0.2
COMMD1-208ENST00000472729 A8MXK9 166 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 C3orf80F5H4A9 247 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 TRIM77I1YAP6 450 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 NDUFA2O43678 99 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 MRPL3P09001 348 aaKnown RBP16.28■□□□□ 0.2
COMMD1-208ENST00000472729 SFRP4Q6FHJ7 346 aaPredicted RBP16.28■□□□□ 0.2
COMMD1-208ENST00000472729 C1orf229Q6ZS94 237 aaPredicted RBP16.28■□□□□ 0.2
COMMD1-208ENST00000472729 CCDC121Q6ZUS5 278 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 AMIGO2Q86SJ2 522 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 TECTBQ96PL2 329 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 CNN2Q99439 309 aaKnown RBP16.28■□□□□ 0.2
COMMD1-208ENST00000472729 ABCB9Q9NP78 766 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 IKZF2Q9UKS7 526 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 INSIG2Q9Y5U4 225 aa16.28■□□□□ 0.2
COMMD1-208ENST00000472729 DNHD1Q96M86 4753 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 FBN1P35555 2871 aaKnown RBP16.27■□□□□ 0.2
COMMD1-208ENST00000472729 SLC22A31A6NKX4 558 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 TRAPPC2LH3BP13 241 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 LGALS8O00214 317 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 ZNF12P17014 697 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 ALOX5APP20292 161 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 NPY4RP50391 375 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 CD276Q5ZPR3 534 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 DEGS2Q6QHC5 323 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 KCTD8Q6ZWB6 473 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 USP43Q70EL4 1123 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 C19orf18Q8NEA5 215 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 RAB40AQ8WXH6 277 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 RTL8AQ9BWD3 113 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 OPN4Q9UHM6 478 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 MPC1Q9Y5U8 109 aa16.27■□□□□ 0.2
COMMD1-208ENST00000472729 hCG_38984A0A1B0GV85 526 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 TMEM269A0A1B0GVZ9 245 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 OOEPA6NGQ2 149 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 PHYHO14832 338 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 PRKYO43930 277 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 MITFO75030 526 aaPredicted RBP16.26■□□□□ 0.19
COMMD1-208ENST00000472729 ZNF254O75437 659 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 PSMA6P60900 246 aaKnown RBP16.26■□□□□ 0.19
COMMD1-208ENST00000472729 ACTG1P63261 375 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 MEPCEQ7L2J0 689 aaKnown RBP16.26■□□□□ 0.19
COMMD1-208ENST00000472729 C10orf67Q8IYJ2 551 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 TCEANCQ8N8B7 351 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 ZFAND2BQ8WV99 257 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 C22orf15Q8WYQ4 148 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 LRTOMTQ8WZ04 291 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 CENPNQ96H22 339 aaPredicted RBP16.26■□□□□ 0.19
COMMD1-208ENST00000472729 MS4A7Q9GZW8 240 aaPredicted RBP16.26■□□□□ 0.19
COMMD1-208ENST00000472729 SEMA6AQ9H2E6 1030 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 NUP50Q9UKX7 468 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 RHBDD3Q9Y3P4 386 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 LRP12Q9Y561 859 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 ORC6Q9Y5N6 252 aa16.26■□□□□ 0.19
COMMD1-208ENST00000472729 ACOD1A6NK06 481 aa16.25■□□□□ 0.19
COMMD1-208ENST00000472729 HAX1O00165 279 aa16.25■□□□□ 0.19
COMMD1-208ENST00000472729 ADAM20O43506 726 aa16.25■□□□□ 0.19
COMMD1-208ENST00000472729 PTBP3O95758 552 aaKnown RBP16.25■□□□□ 0.19
COMMD1-208ENST00000472729 SLC2A5P22732 501 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms