RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 A0A1W2PPE2 198 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 A0A1W2PR64 198 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 A0A1W2PRV1 198 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 F2RL2O00254 374 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 ACOT8O14734 319 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 NDUFB2O95178 105 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUX4L2P0CJ85 424 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUX4L3P0CJ86 424 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUX4L4P0CJ87 422 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUX4L5P0CJ88 424 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUX4L6P0CJ89 424 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUX4L7P0CJ90 424 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 NDUFB7P17568 137 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DDOSTP39656 456 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
SMURF1-203ENST00000472627 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 CRYBA2P53672 197 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 EGFEM1PQ0D2K5 195 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 HABP2Q14520 560 aaPredicted RBP11.31□□□□□ -0.6
SMURF1-203ENST00000472627 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUX4L9Q6RFH8 374 aaPredicted RBP11.31□□□□□ -0.6
SMURF1-203ENST00000472627 OFCC1Q8IZS5 231 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 LNX2Q8N448 690 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 MREGQ8N565 214 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 OR4C15Q8NGM1 316 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUS3LQ96G46 650 aaKnown RBP11.31□□□□□ -0.6
SMURF1-203ENST00000472627 HEXA-AS1Q9H8Q6 139 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DUX4Q9UBX2 424 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 PCDHGB5Q9Y5G0 923 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 DNAH9Q9NYC9 4486 aa11.31□□□□□ -0.6
SMURF1-203ENST00000472627 MEGF11A6BM72 1044 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 SOCS2O14508 198 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 LMO1P25800 156 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 GPR4P46093 362 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 TGM4P49221 684 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 IDH3AP50213 366 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 SLC7A2P52569 658 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 ZNF92Q03936 586 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 FHL1Q13642 323 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 MEP1BQ16820 701 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 ATPAF1Q5TC12 328 aaPredicted RBP11.3□□□□□ -0.6
SMURF1-203ENST00000472627 SLC18B1Q6NT16 456 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 CFAP77Q6ZQR2 320 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 TMPRSS11FQ6ZWK6 438 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 MBOAT2Q6ZWT7 520 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 RNF144BQ7Z419 303 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 C17orf50Q8WW18 174 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 TPD52L3Q96J77 140 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 OR5M11Q96RB7 305 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
SMURF1-203ENST00000472627 A4GNTQ9UNA3 340 aa11.3□□□□□ -0.6
SMURF1-203ENST00000472627 HLA-DQA2P01906 255 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 IFNW1P05000 195 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 GNALP38405 381 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 SLC18A1P54219 525 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 CAV3P56539 151 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 RFX4Q33E94 735 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 LRRC23Q53EV4 343 aaPredicted RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 CYBRD1Q53TN4 286 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 TNFAIP8L3Q5GJ75 292 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 STUMQ69YW2 141 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 DRAM2Q6UX65 266 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 WDR82Q6UXN9 313 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 LINC00346Q8IVM7 164 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 OR5AU1Q8NGC0 362 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 OR56B2PQ8NGI1 322 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 RPS4Y2Q8TD47 263 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 WIPF2Q8TF74 440 aaPredicted RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 FOXRED1Q96CU9 486 aaPredicted RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 MCRIP2Q9BUT9 160 aaKnown RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 CHID1Q9BWS9 393 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 KRCC1Q9NPI7 259 aaPredicted RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 NRIP3Q9NQ35 241 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 HAO2Q9NYQ3 351 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 KCNG2Q9UJ96 466 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 ZNF391Q9UJN7 358 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
SMURF1-203ENST00000472627 BIRC6Q9NR09 4857 aa11.29□□□□□ -0.6
SMURF1-203ENST00000472627 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 VGLL3A8MV65 326 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 RENP00797 406 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMURF1-203ENST00000472627 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
SMURF1-203ENST00000472627 CD83Q01151 205 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 SNCBQ16143 134 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 SNAI3Q3KNW1 292 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 UNQ9370/PRO34162Q6UXP9 181 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 DPY19L2P2Q6ZN68 376 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 PIGWQ7Z7B1 504 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 NAA40Q86UY6 237 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 FAM185AQ8N0U4 392 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 FTMTQ8N4E7 242 aa11.28□□□□□ -0.6
SMURF1-203ENST00000472627 CYB561A3Q8NBI2 242 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms