RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TBC1D23Q9NUY8 699 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 PDP1Q9P0J1 537 aaPredicted RBP6.68□□□□□ -1.34
USP48-207ENST00000471752 ACTR3BQ9P1U1 418 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 CLN8Q9UBY8 286 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ARL2BPQ9Y2Y0 163 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 A0A0U1RQK1 487 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 A0A1W2PRD5 423 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 A0A1W2PRF3 423 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 A0A1W2PRM7 423 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 LRRC30A6NM36 301 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 J3QW42 95 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 DVL1O14640 695 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 ACOT8O14734 319 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 MAGEB4O15481 346 aaPredicted RBP6.67□□□□□ -1.34
USP48-207ENST00000471752 TBX1O43435 398 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 SELENOFO60613 162 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 KRT36O76013 467 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 IGHV4-59P01825 116 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 FMO3P31513 532 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 CX3CR1P49238 355 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 ENTPD1P49961 510 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 MXRA7P84157 204 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 MALLQ13021 153 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 EIF2B1Q14232 305 aaKnown RBP6.67□□□□□ -1.34
USP48-207ENST00000471752 GFOD2Q3B7J2 385 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 OR2T5Q6IEZ7 315 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 C16orf87Q6PH81 154 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 LRRN1Q6UXK5 716 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 TREML4Q6UXN2 200 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 RBMS3Q6XE24 437 aaKnown RBP6.67□□□□□ -1.34
USP48-207ENST00000471752 DCDC5Q6ZRR9 648 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 BTN2A1Q7KYR7 527 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 BCDIN3DQ7Z5W3 292 aaKnown RBP6.67□□□□□ -1.34
USP48-207ENST00000471752 ERI1Q8IV48 349 aaKnown RBP6.67□□□□□ -1.34
USP48-207ENST00000471752 ADGRG5Q8IZF4 528 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 FAM216BQ8N7L0 139 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 OR6K6Q8NGW6 343 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 OR2T4Q8NH00 348 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 OR2T29Q8NH02 315 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 C17orf50Q8WW18 174 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 SPSB4Q96A44 273 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 TMIGD2Q96BF3 282 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 OTULINQ96BN8 352 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 TECTBQ96PL2 329 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 KCNJ15Q99712 375 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 NDEL1Q9GZM8 345 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 SIRPDQ9H106 197 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 PRDM13Q9H4Q3 707 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 SNTG1Q9NSN8 517 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 SAMHD1Q9Y3Z3 626 aaKnown RBP6.67□□□□□ -1.34
USP48-207ENST00000471752 DOCK11Q5JSL3 2073 aa6.67□□□□□ -1.34
USP48-207ENST00000471752 MEGF11A6BM72 1044 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 OOEPA6NGQ2 149 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 ZNF879B4DU55 563 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 M0R129 80 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 PSMD9O00233 223 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 CDIPTO14735 213 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 GMDSO60547 372 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 ANXA2P07355 339 aaKnown RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 MELTFP08582 738 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 POU1F1P28069 291 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 IFNGR2P38484 337 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 OPRL1P41146 370 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 GSK3AP49840 483 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 SLC25A1P53007 311 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 ZNF121P58317 390 aaPredicted RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 ERVFRD-1P60508 538 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 FOXL1Q12952 345 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 SCGB2A2Q13296 93 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 TRIM25Q14258 630 aaKnown RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 GINS1Q14691 196 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 TAF13Q15543 124 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 TEX30Q5JUR7 227 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 LCN8Q6JVE9 175 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 PGM2L1Q6PCE3 622 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 FIP1L1Q6UN15 594 aaKnown RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 DRAM2Q6UX65 266 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 C16orf89Q6UX73 402 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 BTNL3Q6UXE8 466 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 WDR82Q6UXN9 313 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 Q6YL49 198 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 RHOUQ7L0Q8 258 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 DHFR2Q86XF0 187 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 TIGD4Q8IY51 512 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 Q8N7P7 452 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 CELF2-AS1Q8N7Q2 184 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 OR1M1Q8NGA1 313 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 OR10G2Q8NGC3 310 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 OR11L1Q8NGX0 322 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 SGMS2Q8NHU3 365 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 LRRC29Q8WV35 223 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 RNF133Q8WVZ7 376 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 RPL3LQ92901 407 aaKnown RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 LHX4Q969G2 390 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 SPTSSAQ969W0 71 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 CCDC124Q96CT7 223 aaKnown RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 REEP6Q96HR9 211 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 CHID1Q9BWS9 393 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms