RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 PRR14LQ5THK1 2151 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 LY6LH3BQJ8 138 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 TNNI1P19237 187 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 NSG1P42857 185 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 MAGEA6P43360 314 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 ERFP50548 548 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 ZNF140P52738 457 aaPredicted RBP0.35□□□□□ -2.35
COMMD3-209ENST00000471350 SEC61GP60059 68 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 SP4Q02446 784 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 KDSRQ06136 332 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 CCDC152Q4G0S7 254 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 PPM1LQ5SGD2 360 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 TPTE2P1Q5T6R2 138 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 PMF1Q6P1K2 205 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 CERS6Q6ZMG9 384 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 LRRC8AQ8IWT6 810 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 CDH26Q8IXH8 852 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 RPRMLQ8N4K4 120 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 BPIFCQ8NFQ6 507 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 OR8K1Q8NGG5 319 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 OR4D6Q8NGJ1 314 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 NRBF2Q96F24 287 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 TBL1XR1Q9BZK7 514 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 API5Q9BZZ5 524 aaKnown RBP0.35□□□□□ -2.35
COMMD3-209ENST00000471350 ZNF286AQ9HBT8 521 aa0.35□□□□□ -2.35
COMMD3-209ENST00000471350 RRAGDQ9NQL2 400 aaPredicted RBP0.35□□□□□ -2.35
COMMD3-209ENST00000471350 THADAQ6YHU6 1953 aa0.34□□□□□ -2.35
COMMD3-209ENST00000471350 IGKV1-27A0A075B6S5 117 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 A6NDN8 102 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ZNF860A6NHJ4 632 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 C9JVG2 144 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 H7C0C1 242 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 K7EPI3 171 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 RAB29O14966 203 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 SMPD2O60906 423 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ENTPD6O75354 484 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 FGFR1OPO95684 399 aaKnown RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 TGM6O95932 706 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 OR5AC1P0C628 307 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ZNF24P17028 368 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 MX1P20591 662 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 TNNT2P45379 298 aaPredicted RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ATP5OP48047 213 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ACLYP53396 1101 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 PLP1P60201 277 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 EIF3EP60228 445 aaKnown RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 TRDNQ13061 729 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 MAPRE2Q15555 327 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ZNF829Q3KNS6 432 aaPredicted RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 RUFY3Q7L099 469 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 TRMT10CQ7L0Y3 403 aaKnown RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 COMTD1Q86VU5 262 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ZNF567Q8N184 647 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 RNF10Q8N5U6 811 aaKnown RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ECHDC3Q96DC8 303 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 YIPF6Q96EC8 236 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 SLC41A3Q96GZ6 507 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 PEBP4Q96S96 227 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 EMC6Q9BV81 110 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ILKAPQ9H0C8 392 aaPredicted RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 HPF1Q9NWY4 346 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 MRPL16Q9NX20 251 aaKnown RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 CCDC59Q9P031 241 aaKnown RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ISY1Q9ULR0 285 aaKnown RBP0.34□□□□□ -2.36
COMMD3-209ENST00000471350 AP1M2Q9Y6Q5 423 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 ICE1Q9Y2F5 2266 aa0.34□□□□□ -2.36
COMMD3-209ENST00000471350 SIGLEC16A6NMB1 481 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 NCBP2LA6PVI3 153 aaKnown RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 H7C1H1 209 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 CDH16O75309 829 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 CRTAPO75718 401 aaPredicted RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 FARS2O95363 451 aaKnown RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 SERPINA3P01011 423 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 ZNF43P17038 809 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 HNRNPH3P31942 346 aaKnown RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 SLC1A1P43005 524 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 RGS6P49758 472 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 TPMTP51580 245 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 NDUFA8P51970 172 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 EMP2P54851 167 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 SEMG2Q02383 582 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 ATP5G2Q06055 141 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 BST2Q10589 180 aaKnown RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 CTSL3PQ5NE16 218 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 HHATQ5VTY9 493 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 C12orf54Q6X4T0 127 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 Q6ZQT7 251 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 NIPA1Q7RTP0 329 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 CMC1Q7Z7K0 106 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 BPIFB6Q8NFQ5 453 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 SFXN5Q8TD22 340 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 SLC29A1Q99808 456 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 MS4A8Q9BY19 250 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 TTTY12Q9BZ98 90 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 ROPN1BQ9BZX4 212 aaPredicted RBP0.33□□□□□ -2.36
COMMD3-209ENST00000471350 VCX2Q9H322 139 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 KIR3DX1Q9H7L2 352 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 PLEKHF2Q9H8W4 249 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 CYP3A43Q9HB55 503 aa0.33□□□□□ -2.36
COMMD3-209ENST00000471350 RGS18Q9NS28 235 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms