RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ST3GAL4Q11206 333 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 TSPAN31Q12999 210 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 PTGES3Q15185 160 aaKnown RBP11.43□□□□□ -0.58
HMGN1-211ENST00000471260 OCLNQ16625 522 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 AVPI1Q5T686 147 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 RPL13AP3Q6NVV1 102 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 SLC27A4Q6P1M0 643 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 LEG1Q6P5S2 330 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 ZBTB46Q86UZ6 589 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 OR9Q2Q8NGE9 314 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 APOBEC3DQ96AK3 386 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-211ENST00000471260 CMBLQ96DG6 245 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 REPIN1Q9BWE0 567 aaKnown RBP11.43□□□□□ -0.58
HMGN1-211ENST00000471260 PRRG3Q9BZD7 231 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 SRA1Q9HD15 236 aaKnown RBP11.43□□□□□ -0.58
HMGN1-211ENST00000471260 G6PC2Q9NQR9 355 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 B9D1Q9UPM9 204 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 STARD10Q9Y365 291 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 CACNG2Q9Y698 323 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 A0A075B6Q4 140 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 A0A0G2JMP0 313 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 A0A0X1KG70 313 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 LOC110117498-PIK3R3F6TDL0 507 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 J3QLI3 93 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 DCTN6O00399 190 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 HIST1H1CP16403 213 aaKnown RBP11.42□□□□□ -0.58
HMGN1-211ENST00000471260 GADD45AP24522 165 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 ARMCX4Q5H9R4 360 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 FAHD2BQ6P2I3 314 aaPredicted RBP11.42□□□□□ -0.58
HMGN1-211ENST00000471260 FBXW12Q6X9E4 464 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 OR6V1Q8N148 313 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 OR4M2Q8NGB6 313 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 OR8J1Q8NGP2 316 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 CHAC2Q8WUX2 184 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 FAHD2AQ96GK7 314 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 TSSK2Q96PF2 358 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 NMNAT3Q96T66 252 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 GAL3ST1Q99999 423 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 NEURL2Q9BR09 285 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 CCDC32Q9BV29 185 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 C19orf24Q9BVV8 132 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 IFT27Q9BW83 186 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 MND1Q9BWT6 205 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 LPAR2Q9HBW0 351 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 SLC25A19Q9HC21 320 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 PAIP2BQ9ULR5 123 aaKnown RBP11.42□□□□□ -0.58
HMGN1-211ENST00000471260 RPL36Q9Y3U8 105 aaKnown RBP11.42□□□□□ -0.58
HMGN1-211ENST00000471260 NPTNQ9Y639 398 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 STAB1Q9NY15 2570 aa11.42□□□□□ -0.58
HMGN1-211ENST00000471260 PPIAL4EA0A075B759 164 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 PPIAL4CA0A0B4J2A2 164 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 SNTNA6NMZ2 147 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 PPIAL4DF5H284 164 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 IFNL4K9M1U5 179 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 PLPP2O43688 288 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 PPIAL4FP0DN26 164 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 CENPAP49450 140 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 DEFA1P59665 94 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 DEFA3P59666 94 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 ECH1Q13011 328 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 TMEM236Q5W0B7 351 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 PGBD2Q6P3X8 592 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 ZNF620Q6ZNG0 422 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 ZNF283Q8N7M2 679 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 SLC26A10Q8NG04 563 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 OR2Z1Q8NG97 314 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 OR9Q1Q8NGQ5 310 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 OR4K13Q8NH42 304 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 SLC7A6Q92536 515 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 CDADC1Q9BWV3 514 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 POFUT1Q9H488 388 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 METTL17Q9H7H0 456 aaPredicted RBP11.41□□□□□ -0.58
HMGN1-211ENST00000471260 ISYNA1Q9NPH2 558 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 TMEM106BQ9NUM4 274 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 IL20Q9NYY1 176 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 KCNG2Q9UJ96 466 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.41□□□□□ -0.58
HMGN1-211ENST00000471260 LHFPL6Q9Y693 200 aa11.41□□□□□ -0.58
HMGN1-211ENST00000471260 TANC2Q9HCD6 1990 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 SELEP16581 610 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 CPT2P23786 658 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 C21orf33P30042 268 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-211ENST00000471260 LSM3P62310 102 aaKnown RBP11.4□□□□□ -0.58
HMGN1-211ENST00000471260 MLLT11Q13015 90 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-211ENST00000471260 CBX3Q13185 183 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 KRTAP27-1Q3LI81 207 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 TMEM155Q4W5P6 130 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 Q6ZR03 302 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 COLCA1Q6ZS62 124 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 SPICQ8N5J4 248 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 PROKR2Q8NFJ6 384 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 OR8G5Q8NG78 346 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 OR52L1Q8NGH7 329 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 OR2AJ1Q8NGZ0 328 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 OR13G1Q8NGZ3 307 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 SETD6Q8TBK2 473 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 ST7LQ8TDW4 575 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 RPL3LQ92901 407 aaKnown RBP11.4□□□□□ -0.58
HMGN1-211ENST00000471260 MGLLQ99685 303 aa11.4□□□□□ -0.58
HMGN1-211ENST00000471260 C1QTNF5Q9BXJ0 243 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms