RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 POMT1Q9Y6A1 747 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 CENPVL3A0A0U1RRI6 287 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 DHRS12A0PJE2 317 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 ECDO95905 644 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-208ENST00000470076 IFNGP01579 166 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 APOC1P02654 83 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 GYPAP02724 150 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 ATP6V1B2P21281 511 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 TEX36Q5VZQ5 186 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 FIP1L1Q6UN15 594 aaKnown RBP14.48□□□□□ -0.09
COL7A1-208ENST00000470076 SLC16A9Q7RTY1 509 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 OR4Q3Q8NH05 313 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 DGCR6LQ9BY27 220 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 SIRPDQ9H106 197 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 MARCH7Q9H992 704 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 RNPEPL1Q9HAU8 725 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 BEX1Q9HBH7 125 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 ACOXLQ9NUZ1 547 aa14.48□□□□□ -0.09
COL7A1-208ENST00000470076 RIIAD1A6NNX1 92 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 DVL1O14640 695 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 TBX1O43435 398 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 KCNAB3O43448 404 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 SOX14O95416 240 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 KNG1P01042 644 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 ANXA2P07355 339 aaKnown RBP14.47□□□□□ -0.09
COL7A1-208ENST00000470076 MELTFP08582 738 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 CLUP10909 449 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 ZNF3P17036 446 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 CFL1P23528 166 aaKnown RBP14.47□□□□□ -0.09
COL7A1-208ENST00000470076 HSD11B1P28845 292 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 CX3CR1P49238 355 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 RAG2P55895 527 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 RPL15P61313 204 aaKnown RBP14.47□□□□□ -0.09
COL7A1-208ENST00000470076 FAM3AP98173 230 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 PPP1R8Q12972 351 aaKnown RBP14.47□□□□□ -0.09
COL7A1-208ENST00000470076 TIGD6Q17RP2 521 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 MICAQ29983 383 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 BTN2A1Q7KYR7 527 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 PIGWQ7Z7B1 504 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 ARHGAP24Q8N264 748 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 OR52H1Q8NGJ2 320 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 SSMEM1Q8WWF3 244 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 CHIAQ9BZP6 476 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 RASSF4Q9H2L5 321 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 MUC13Q9H3R2 512 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 REEP1Q9H902 201 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 TNFRSF19Q9NS68 423 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 ARMC1Q9NVT9 282 aa14.47□□□□□ -0.09
COL7A1-208ENST00000470076 SAMHD1Q9Y3Z3 626 aaKnown RBP14.47□□□□□ -0.09
COL7A1-208ENST00000470076 IGHV1-69DA0A0B4J2H0 117 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 TCRBV5S2A0A599 114 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 TIPRLO75663 272 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 NDUFA7O95182 113 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 IGHV1-69P01742 117 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 MUC1P15941 1255 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-208ENST00000470076 EIF2B1Q14232 305 aaKnown RBP14.46□□□□□ -0.09
COL7A1-208ENST00000470076 MICBQ29980 383 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 LINC01590Q5TEZ4 76 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 OR2T5Q6IEZ7 315 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 RHOUQ7L0Q8 258 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 DPY19L4Q7Z388 723 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 OR2T29Q8NH02 315 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 TBC1D15Q8TC07 691 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 RNF133Q8WVZ7 376 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 SGK3Q96BR1 496 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 REEP6Q96HR9 211 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 INTS14Q96SY0 518 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 CMC2Q9NRP2 79 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 C1RLQ9NZP8 487 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 U3KQV3 271 aa14.46□□□□□ -0.09
COL7A1-208ENST00000470076 VWFP04275 2813 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 FCN3O75636 299 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 ARF6P62330 175 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 SNCBQ16143 134 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 FAM98BQ52LJ0 330 aaKnown RBP14.45□□□□□ -0.1
COL7A1-208ENST00000470076 LCN8Q6JVE9 175 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 CD300LDQ6UXZ3 194 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 C17orf107Q6ZR85 190 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 WDR86Q86TI4 376 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 DHFR2Q86XF0 187 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 ERI1Q8IV48 349 aaKnown RBP14.45□□□□□ -0.1
COL7A1-208ENST00000470076 C11orf53Q8IXP5 236 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 KIR3DL3Q8N743 410 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 OR1M1Q8NGA1 313 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 OR6N2Q8NGY6 317 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 LRRC29Q8WV35 223 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 WFDC12Q8WWY7 111 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 ST8SIA4Q92187 359 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 LHX4Q969G2 390 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 DMRTB1Q96MA1 342 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 ABHD6Q9BV23 337 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 CNTD2Q9H8S5 307 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 VNN3Q9NY84 501 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 RPUSD1Q9UJJ7 312 aaKnown RBP14.45□□□□□ -0.1
COL7A1-208ENST00000470076 KPTNQ9Y664 436 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 WNK1Q9H4A3 2382 aa14.45□□□□□ -0.1
COL7A1-208ENST00000470076 IGHV3OR15-7A0A075B7D8 119 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 hCG_38984A0A1B0GV85 526 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 GNALP38405 381 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 NAA10P41227 235 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms