RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 NKAIN3Q8N8D7 197 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 OR4C3Q8NH37 302 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 C2CD4CQ8TF44 421 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 TMED6Q8WW62 240 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 WNT2BQ93097 391 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 ARL5BQ96KC2 179 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 AQP10Q96PS8 301 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 CRB3Q9BUF7 120 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 SYT4Q9H2B2 425 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 OR51M1Q9H341 326 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 TUBA4BQ9H853 241 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 UCK1Q9HA47 277 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 OCIAD1Q9NX40 245 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 DNAJB11Q9UBS4 358 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 KCNG2Q9UJ96 466 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 RAB22AQ9UL26 194 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 C5orf51A6NDU8 294 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 LILRA5A6NI73 299 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 CYSRT1A8MQ03 144 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF705EA8MWA4 302 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-205ENST00000469550 EEF1E1-BLOC1S5C9J1V9 151 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 RAB27BO00194 218 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 MFNGO00587 321 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 EIF1BO60739 113 aaKnown RBP8.52□□□□□ -1.05
HDAC3-205ENST00000469550 EML2O95834 649 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 PNPP00491 289 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 F12P00748 615 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-205ENST00000469550 F13BP05160 661 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 ISG15P05161 165 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 GLAP06280 429 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 MUC1P15941 1255 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-205ENST00000469550 NFYBP25208 207 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 SERPINF1P36955 418 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 EIF1P41567 113 aaKnown RBP8.52□□□□□ -1.05
HDAC3-205ENST00000469550 HHEXQ03014 270 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 SMCO1Q147U7 214 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 OR7A5Q15622 319 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 FAM209BQ5JX69 171 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 FNDC7Q5VTL7 733 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 PRSS54Q6PEW0 395 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 RHOUQ7L0Q8 258 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 RNF44Q7L0R7 432 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 CD163Q86VB7 1156 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 FJX1Q86VR8 437 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 CATSPERDQ86XM0 798 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF561Q8N587 486 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 ZSCAN4Q8NAM6 433 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-205ENST00000469550 SLC25A44Q96H78 314 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-205ENST00000469550 OR5B2Q96R09 309 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 RAB18Q9NP72 206 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 TAS2R4Q9NYW5 299 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-205ENST00000469550 SLC22A13Q9Y226 551 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 RHBDD3Q9Y3P4 386 aa8.52□□□□□ -1.05
HDAC3-205ENST00000469550 KIR2DS5A0A0G2JLQ3 304 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 A0A0G2JNG1 304 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 TMEM235A6NFC5 223 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 OR2W5A6NFC9 320 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 CEACAM18A8MTB9 384 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 KIR2DS3K7RE56 304 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 TAAR5O14804 337 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 CT45A8P0DMV1 189 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 CT45A9P0DMV2 189 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 AGAP20933 346 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 EGR4Q05215 589 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 KIR2DS5Q14953 304 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 MOGAT2Q3SYC2 334 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 CT45A2Q5DJT8 189 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 IGSF11Q5DX21 431 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 TMEM244Q5VVB8 128 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 KCTD9Q7L273 389 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 MAMDC2Q7Z304 686 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-205ENST00000469550 HOGA1Q86XE5 327 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 BCORP1Q8N888 145 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 OR4S1Q8NGB4 309 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 OR10R2Q8NGX6 335 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 C8orf44Q96CB5 159 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 RRNAD1Q96FB5 475 aaKnown RBP8.51□□□□□ -1.05
HDAC3-205ENST00000469550 METTL1Q9UBP6 276 aaKnown RBP8.51□□□□□ -1.05
HDAC3-205ENST00000469550 HHLA2Q9UM44 414 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 B9D1Q9UPM9 204 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 TIMM10BQ9Y5J6 103 aa8.51□□□□□ -1.05
HDAC3-205ENST00000469550 SPTA1P02549 2419 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 BLACEA4D250 179 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 CLEC18AA5D8T8 446 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 H0YIZ8 118 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 H7C1C5 153 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 OR2T1O43869 369 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 FBXO24O75426 580 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 MT-ND4LP03901 98 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 FCGR3AP08637 254 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 SFTA3P0C7M3 94 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 RCC1P18754 421 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 VAMP1P23763 118 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 RPS27P42677 84 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 PGDP52209 483 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 RIDAP52758 137 aaKnown RBP8.5□□□□□ -1.05
HDAC3-205ENST00000469550 LCN6P62502 163 aa8.5□□□□□ -1.05
HDAC3-205ENST00000469550 BTG2P78543 158 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms