RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 LRRC29Q8WV35 223 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 UBE2FQ969M7 185 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 SLC22A4Q9H015 551 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 TCF7L1Q9HCS4 588 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 ARGLU1Q9NWB6 273 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-204ENST00000469207 MRPL15Q9P015 296 aaKnown RBP10.09□□□□□ -0.79
HDAC3-204ENST00000469207 ONECUT1Q9UBC0 465 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 SAMD4AQ9UPU9 718 aaKnown RBP10.09□□□□□ -0.79
HDAC3-204ENST00000469207 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-204ENST00000469207 ZNF593O00488 134 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-204ENST00000469207 ACOT8O14734 319 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 TBX1O43435 398 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 NDUFA2O43678 99 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 CCDC22O60826 627 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 SPARCP09486 303 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 TSPAN31Q12999 210 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 KLRD1Q13241 179 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 IKZF1Q13422 519 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 PCK2Q16822 640 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 CDONQ4KMG0 1287 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 WDR38Q5JTN6 314 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 DRAM2Q6UX65 266 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 Q8N7P7 452 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 PLPP7Q8NBV4 271 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 SLC37A3Q8NCC5 494 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 LY6G5BQ8NDX9 201 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 OR9Q2Q8NGE9 314 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 GNPDA2Q8TDQ7 276 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 SGK3Q96BR1 496 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 SLAMF6Q96DU3 332 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 KCNJ15Q99712 375 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 COPS4Q9BT78 406 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 GORASP2Q9H8Y8 452 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 SNTG1Q9NSN8 517 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 ZNF319Q9P2F9 582 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 FAM96BQ9Y3D0 163 aa10.08□□□□□ -0.8
HDAC3-204ENST00000469207 ZNF816-ZNF321PA0A0X1KG74 233 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 SLC22A31A6NKX4 558 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 RNASEK-C17orf49H0YIS7 233 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 CDIPTO14735 213 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 IDH3BO43837 385 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 GASTP01350 101 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 PAX6P26367 422 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 SMIM11AP58511 58 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 FAM3AP98173 230 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 TAF13Q15543 124 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 SLC35E4Q6ICL7 350 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 WDR82Q6UXN9 313 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 SLC16A9Q7RTY1 509 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 DPY19L4Q7Z388 723 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 LDLRAD3Q86YD5 345 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 ZDHHC21Q8IVQ6 265 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 SPERTQ8NA61 448 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 OR1M1Q8NGA1 313 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 OR8S1Q8NH09 359 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 BTBD10Q9BSF8 475 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 MYLK2Q9H1R3 596 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 WDR13Q9H1Z4 485 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 CCDC134Q9H6E4 229 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 SPAG4Q9NPE6 437 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 ZNF446Q9NWS9 450 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 KAAG1Q9UBP8 84 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 KCNG2Q9UJ96 466 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 SIGLEC9Q9Y336 463 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 COMMD3-BMI1R4GMX3 469 aa10.07□□□□□ -0.8
HDAC3-204ENST00000469207 ANKRD30BLA7E2S9 258 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 NDUFAB1O14561 156 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 GMNNO75496 209 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 ECDO95905 644 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-204ENST00000469207 PRB2P02812 416 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-204ENST00000469207 FABP3P05413 133 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 ENTPD1P49961 510 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 EGR3Q06889 387 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 CRMP1Q14194 572 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 MICBQ29980 383 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 GFOD2Q3B7J2 385 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 KLHL12Q53G59 568 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 LINC00471Q8N535 108 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 OR2T4Q8NH00 348 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 OR4Q3Q8NH05 313 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 C17orf50Q8WW18 174 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 SPSB4Q96A44 273 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 REEP6Q96HR9 211 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 AMELYQ99218 206 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 ELAC2Q9BQ52 826 aaKnown RBP10.06□□□□□ -0.8
HDAC3-204ENST00000469207 DPAGT1Q9H3H5 408 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 MED20Q9H944 212 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 BRD7Q9NPI1 651 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 TRIM36Q9NQ86 728 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 C14orf119Q9NWQ9 140 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 DNAJC27Q9NZQ0 273 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 ZNRD1Q9P1U0 126 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 NOP16Q9Y3C1 178 aaKnown RBP10.06□□□□□ -0.8
HDAC3-204ENST00000469207 RHBDD3Q9Y3P4 386 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 KPTNQ9Y664 436 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 CDH10Q9Y6N8 788 aa10.06□□□□□ -0.8
HDAC3-204ENST00000469207 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-204ENST00000469207 A0A1B0GVI7 797 aa10.05□□□□□ -0.8
HDAC3-204ENST00000469207 DHRS12A0PJE2 317 aa10.05□□□□□ -0.8
HDAC3-204ENST00000469207 ANXA2P07355 339 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms