RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SLC1A2P43004 574 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 LRRC63Q05C16 580 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 METTL21CQ5VZV1 264 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 CBLN2Q8IUK8 224 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 JAGN1Q8N5M9 183 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 NPWQ8N729 165 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 OR56A4Q8NGH8 313 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 ABHD3Q8WU67 409 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 PEX13Q92968 403 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 TMEM230Q96A57 120 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 CFAP53Q96M91 514 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 VCXQ9H320 206 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 SPG11Q96JI7 2443 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 LY75O60449 1722 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 LRP4O75096 1905 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 WNK3Q9BYP7 1800 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 SPAG7O75391 227 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 FCN3O75636 299 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 CLTAP09496 248 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 STAG3L3P0CL85 134 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 U2AF2P26368 475 aaKnown RBP eCLIP3.12□□□□□ -1.91
LSM5-209ENST00000468872 UBE2MP61081 183 aaKnown RBP3.12□□□□□ -1.91
LSM5-209ENST00000468872 RAP1AP62834 184 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 SEMG2Q02383 582 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 NPSR1Q6W5P4 371 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 C12orf54Q6X4T0 127 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 Q6ZR03 302 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 TMCO2Q7Z6W1 182 aaPredicted RBP3.12□□□□□ -1.91
LSM5-209ENST00000468872 SAXO1Q8IYX7 474 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 CYB561D1Q8N8Q1 229 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 OR10G2Q8NGC3 310 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 OR52E2Q8NGJ4 325 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 OR5W2Q8NH69 310 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 UBE2ZQ9H832 354 aaPredicted RBP3.12□□□□□ -1.91
LSM5-209ENST00000468872 MRPL22Q9NWU5 206 aaKnown RBP3.12□□□□□ -1.91
LSM5-209ENST00000468872 PSG11Q9UQ72 335 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 RCL1Q9Y2P8 373 aaKnown RBP3.12□□□□□ -1.91
LSM5-209ENST00000468872 C4AP0C0L4 1744 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 MON2Q7Z3U7 1717 aa3.12□□□□□ -1.91
LSM5-209ENST00000468872 NSD3Q9BZ95 1437 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 IGSF10Q6WRI0 2623 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 ALPK3Q96L96 1907 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 EP300Q09472 2414 aaPredicted RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 TLN1Q9Y490 2541 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 IGHV5-10-1A0A0J9YXX1 117 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 H0YC42 278 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 L7N2F9 121 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 M0R3G1 203 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 CASC3O15234 703 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 AKR7A2O43488 359 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 RDH16O75452 317 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 LSM8O95777 96 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 HLA-HP01893 362 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 HBE1P02100 147 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 CD3GP09693 182 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 UBCP0CG48 685 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 PGAM1P18669 254 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 CSNK2A2P19784 350 aaPredicted RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 WARSP23381 471 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 NBL1P41271 181 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 OR1G1P47890 313 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 MNAT1P51948 309 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 PRR3P79522 188 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 PTGES3Q15185 160 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 QPRTQ15274 297 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 FAM83EQ2M2I3 478 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 KRTAP21-3Q3LHN1 58 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 TFDP3Q5H9I0 405 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 STUMQ69YW2 141 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 MBOAT2Q6ZWT7 520 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 OTUD6AQ7L8S5 288 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 MICU2Q8IYU8 434 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 PGAM4Q8N0Y7 254 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 C8orf31Q8N9H6 132 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 CHST4Q8NCG5 386 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 LRRC29Q8WV35 223 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 APH1BQ8WW43 257 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 NTAN1Q96AB6 310 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 TM4SF18Q96CE8 201 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 IQCGQ9H095 443 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 SYNDIG1Q9H7V2 258 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 C12orf10Q9HB07 376 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 MYOZ2Q9NPC6 264 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 FAM49BQ9NUQ9 324 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 MYEF2Q9P2K5 600 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 PSME2Q9UL46 239 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 CHTOPQ9Y3Y2 248 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 DICER1Q9UPY3 1922 aaKnown RBP3.11□□□□□ -1.91
LSM5-209ENST00000468872 NF1P21359 2839 aa3.11□□□□□ -1.91
LSM5-209ENST00000468872 DSPP15924 2871 aaKnown RBP3.1□□□□□ -1.91
LSM5-209ENST00000468872 CEP295Q9C0D2 2601 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 TRIOO75962 3097 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 H7C0C1 242 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 H7C417 338 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 BCKDKO14874 412 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 SLC25A14O95258 325 aaPredicted RBP3.1□□□□□ -1.91
LSM5-209ENST00000468872 IFNW1P05000 195 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 IGHV1-8P0DP01 117 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 CASQ1P31415 396 aa3.1□□□□□ -1.91
LSM5-209ENST00000468872 TNFSF9P41273 254 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms