RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 HHLA2Q9UM44 414 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 LAMP3Q9UQV4 416 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 SIRT4Q9Y6E7 314 aaPredicted RBP13.01□□□□□ -0.33
SNIP1-202ENST00000468040 A0A1B0GTI1 187 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 ANKRD30BLA7E2S9 258 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 CD8AP01732 235 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 MMP15P51511 669 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 PRSS12P56730 875 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 SLC3A1Q07837 685 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 RIPPLY1Q0D2K3 151 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 GPR50Q13585 617 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 TMEM255AQ5JRV8 349 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 ZBTB37Q5TC79 503 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 UBE2UQ5VVX9 321 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 C11orf71Q6IPW1 123 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 RDH10Q8IZV5 341 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 OR5AS1Q8N127 324 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 ZFP41Q8N8Y5 198 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 BHLHE23Q8NDY6 225 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 OR8G5Q8NG78 346 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 GHSRQ92847 366 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 CCL19Q99731 98 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 SLC22A4Q9H015 551 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 MS4A5Q9H3V2 200 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 PLEKHA1Q9HB21 404 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 MRPL15Q9P015 296 aaKnown RBP13□□□□□ -0.33
SNIP1-202ENST00000468040 ZNF281Q9Y2X9 895 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 NOP16Q9Y3C1 178 aaKnown RBP13□□□□□ -0.33
SNIP1-202ENST00000468040 PMF1-BGLAPU3KQ54 211 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 V9GYS6 101 aa13□□□□□ -0.33
SNIP1-202ENST00000468040 MAGEA13PA6NCF6 341 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 RAF1P04049 648 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 CPEP16870 476 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 CD53P19397 219 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 ALDH3B1P43353 468 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 PPOXP50336 477 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 KRTAP10-9P60411 292 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 TPBGQ13641 420 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 DOC2BQ14184 412 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 ALKBH6Q3KRA9 238 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 YIF1BQ5BJH7 314 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 KCTD8Q6ZWB6 473 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 OR14K1Q8NGZ2 314 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 OR13G1Q8NGZ3 307 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 GPR148Q8TDV2 347 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 PIGTQ969N2 578 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 C10orf35Q96D05 121 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 PGLYRP3Q96LB9 341 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 SLC30A2Q9BRI3 323 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 SOX7Q9BT81 388 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 CXorf56Q9H5V9 222 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 TMEM100Q9NV29 134 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 ENPP5Q9UJA9 477 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 ZDHHC8Q9ULC8 765 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 ROS1P08922 2347 aa12.99□□□□□ -0.33
SNIP1-202ENST00000468040 ZNF816-ZNF321PA0A0X1KG74 233 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 PNMA8CA0A1B0GUJ8 204 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 CST4P01036 141 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
SNIP1-202ENST00000468040 ACKR3P25106 362 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 PSMB9P28065 219 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 GNALP38405 381 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 ZNF81P51508 661 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 TNK1Q13470 666 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 NEDD8Q15843 81 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 OR13C3Q8NGS6 347 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 IGFBPL1Q8WX77 278 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 OPALINQ96PE5 141 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 DIRC2Q96SL1 478 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 CACNG6Q9BXT2 260 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 ABCB9Q9NP78 766 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 PIGLQ9Y2B2 252 aa12.98□□□□□ -0.33
SNIP1-202ENST00000468040 ZSCAN5BA6NJL1 495 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 C17orf100A8MU93 164 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 H3BSH0 61 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 H7C417 338 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 LILRA1O75019 489 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 NAT2P11245 290 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 FAHP16930 419 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 PSMA1P25786 263 aaKnown RBP12.97□□□□□ -0.33
SNIP1-202ENST00000468040 PCGF3Q3KNV8 242 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 ARMCX4Q5H9R4 360 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 LIPKQ5VXJ0 399 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 KRT74Q7RTS7 529 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 PHC2Q8IXK0 858 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 MS4A15Q8N5U1 240 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 TSEN15Q8WW01 171 aaKnown RBP12.97□□□□□ -0.33
SNIP1-202ENST00000468040 NRGNQ92686 78 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 THRSPQ92748 146 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 PAPOLGQ9BWT3 736 aaKnown RBP12.97□□□□□ -0.33
SNIP1-202ENST00000468040 LIME1Q9H400 295 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 MSL2Q9HCI7 577 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 ZNF275Q9NSD4 429 aaPredicted RBP12.97□□□□□ -0.33
SNIP1-202ENST00000468040 DHDHQ9UQ10 334 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 MPC1Q9Y5U8 109 aa12.97□□□□□ -0.33
SNIP1-202ENST00000468040 A0A1B0GWJ7 208 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 OVOL3O00110 214 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 SPRY3O43610 288 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 GMDSO60547 372 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms