RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CLDN14O95500 239 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 AGAP20933 346 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 PCMT1P22061 227 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ACTA2P62736 377 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ACTG2P63267 376 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 EGR3Q06889 387 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 TFF3Q07654 80 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 RIPPLY1Q0D2K3 151 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ALKBH1Q13686 389 aaKnown RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 DOC2BQ14184 412 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 IRF3Q14653 427 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 TAB1Q15750 504 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 TP53I3Q53FA7 332 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 PABPC1L2AQ5JQF8 200 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ELFN2Q5R3F8 820 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 TIMM23BQ5SRD1 257 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ZNF684Q5T5D7 378 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 MDP1Q86V88 176 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ZNF584Q8IVC4 421 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ZNF679Q8IYX0 411 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ZNF808Q8N4W9 903 aaPredicted RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 NANOGP1Q8N7R0 232 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 WDR31Q8NA23 367 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 CLRN3Q8NCR9 226 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 STEAP2Q8NFT2 490 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 NANPQ8TBE9 248 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 DEDD2Q8WXF8 326 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ASB17Q8WXJ9 295 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 DMRTB1Q96MA1 342 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 OR8B4Q96RC9 309 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 MRM2Q9UI43 246 aaKnown RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 GNG8Q9UK08 70 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 FBXL3Q9UKT7 428 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 LRP12Q9Y561 859 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 GCN1Q92616 2671 aaKnown RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 PKDREJQ9NTG1 2253 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ICE1Q9Y2F5 2266 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ZNF729A6NN14 1252 aaPredicted RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 J3QLW9 94 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 SYNGR3O43761 229 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 CIDEAO60543 219 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 AGFG2O95081 481 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 SMIM6P0DI80 62 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 PRF1P14222 555 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ZNF19P17023 458 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ARR3P36575 388 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ROM1Q03395 351 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 SNTB1Q13884 538 aaKnown RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 MED22Q15528 200 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 TBCEQ15813 527 aaPredicted RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 RNLSQ5VYX0 342 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 MYPOPQ86VE0 399 aaPredicted RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 CPEB3Q8NE35 698 aaKnown RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 OR13F1Q8NGS4 319 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 GATAD2BQ8WXI9 593 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 SLC7A6Q92536 515 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 RNASE6Q93091 150 aaKnown RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 MS4A3Q96HJ5 214 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ZNF75AQ96N20 296 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 OR5M11Q96RB7 305 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ATF6BQ99941 703 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 MND1Q9BWT6 205 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 C1QTNF6Q9BXI9 259 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ALX4Q9H161 411 aaPredicted RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ESRP2Q9H6T0 727 aaKnown RBP5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ELOVL3Q9HB03 270 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 ACOT13Q9NPJ3 140 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 SLC25A15Q9Y619 301 aa5.97□□□□□ -1.45
SCAF4-204ENST00000467731 HRNRQ86YZ3 2850 aaPredicted RBP5.96□□□□□ -1.45
SCAF4-204ENST00000467731 ABHD16AO95870 558 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 LALBAP00709 142 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 IGKV3-15P01624 115 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 IFNA4P05014 189 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 CELA3BP08861 270 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 DBHP09172 617 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 H2BFMP0C1H6 154 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 RAB4AP20338 218 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 APEX1P27695 318 aaKnown RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 GPX4P36969 197 aaPredicted RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 HTR5AP47898 357 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 WNT4P56705 351 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 TAS2R60P59551 318 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SLC3A1Q07837 685 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 RAB35Q15286 201 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 NEDD8Q15843 81 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SWI5Q1ZZU3 235 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 LIPNQ5VXI9 398 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 XAF1Q6GPH4 301 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 KCTD8Q6ZWB6 473 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 DPPA2Q7Z7J5 298 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 P2RY8Q86VZ1 359 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SYS1Q8N2H4 156 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SVOPQ8N4V2 548 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 YIPF7Q8N8F6 280 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 ZNF485Q8NCK3 441 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 OR4M1Q8NGD0 313 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SPRYD4Q8WW59 207 aaPredicted RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 ZC3HAV1LQ96H79 300 aaKnown RBP5.96□□□□□ -1.46
SCAF4-204ENST00000467731 LURAP1Q96LR2 239 aa5.96□□□□□ -1.46
SCAF4-204ENST00000467731 SHARPINQ9H0F6 387 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms