RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RAB36O95755 333 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 IGHV3-13P01766 116 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 IGHV2-70P01814 119 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 RLN1P04808 185 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 MELTFP08582 738 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 STAG3L2P0CL84 134 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 UQCRBP14927 111 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 TUBG1P23258 451 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 CD80P33681 288 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 RPL3P39023 403 aaKnown RBP4.5□□□□□ -1.69
PTCD3-207ENST00000467273 MAGEA12P43365 314 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 CCT3P49368 545 aaKnown RBP4.5□□□□□ -1.69
PTCD3-207ENST00000467273 HTR6P50406 440 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 RAB14P61106 215 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 NAA20P61599 178 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 PAX2Q02962 417 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 SLAQ13239 276 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 GSTA3Q16772 222 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 DEFB112Q30KQ8 113 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 ARHGAP11BQ3KRB8 267 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 TTMPQ5BVD1 217 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 FAM76BQ5HYJ3 339 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 SPANXN2Q5MJ10 180 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 GPR157Q5UAW9 335 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 LCN1P1Q5VSP4 162 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 SUMO4Q6EEV6 95 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 C11orf87Q6NUJ2 197 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 NIPAL3Q6P499 406 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 EMBQ6PCB8 327 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 Q6ZTK2 550 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 LINGO2Q7L985 606 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM99Q8N816 258 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 DNAAF1Q8NEP3 725 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 OR4S1Q8NGB4 309 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 OR56B1Q8NGI3 324 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 OR10S1Q8NGN2 331 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 BBS10Q8TAM1 723 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 OSR1Q8TAX0 266 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-207ENST00000467273 FAM81AQ8TBF8 368 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 SYNPRQ8TBG9 265 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 SFXN5Q8TD22 340 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 C11orf40Q8WZ69 217 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 CCL17Q92583 94 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 CIDECQ96AQ7 238 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-207ENST00000467273 LRR1Q96L50 414 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 TAPBPLQ9BX59 468 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 BCL2L14Q9BZR8 327 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 HRH4Q9H3N8 390 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 AUNIPQ9H7T9 357 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 MARCH7Q9H992 704 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 RNPEPL1Q9HAU8 725 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 TUBG2Q9NRH3 451 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 CYSLTR2Q9NS75 346 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 ERVK-18Q9QC07 812 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 RNF14Q9UBS8 474 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 RNF24Q9Y225 148 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 NPTNQ9Y639 398 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 BIRC6Q9NR09 4857 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 ARHGAP32A7KAX9 2087 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 A0A096LPI6 279 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 LOC102725191A0A1B0GVB3 256 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM247A6NEH6 219 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 C5orf52A6NGY3 159 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 TNFRSF13BO14836 293 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 TM9SF1O15321 606 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 RAD51CO43502 376 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 MITFO75030 526 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 SNNO75324 88 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 SUPT7LO94864 414 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 KDM4BO94953 1096 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 FSTL3O95633 263 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 PPP1R3DO95685 299 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 PTHP01270 115 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 SERPINA5P05154 406 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 SFTPBP07988 381 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 CD55P08174 381 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF43P17038 809 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 TAC1P20366 129 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 IMPDH1P20839 514 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 MSR1P21757 451 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 UQCRC2P22695 453 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 RYKP34925 604 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 IDH2P48735 452 aaKnown RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 CEBPDP49716 269 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 CAMPP49913 170 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 P2RY4P51582 365 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 RPL23AP62750 156 aaKnown RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 MZT1Q08AG7 82 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 BST1Q10588 318 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 CEACAM7Q14002 265 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 GPR176Q14439 515 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 HERPUD1Q15011 391 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 KIAA0040Q15053 153 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 USF2Q15853 346 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 CEACAM16Q2WEN9 425 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 ATP6AP1LQ52LC2 224 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM41BQ5BJD5 291 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF678Q5SXM1 525 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 UNQ6126/PRO20091Q6UXV3 157 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 RNF165Q6ZSG1 346 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms