RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 NDUFB6O95139 128 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 B4GALT1P15291 398 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 VEGFCP49767 419 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 DHODHQ02127 395 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 PCK2Q16822 640 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 LGALSLQ3ZCW2 172 aaPredicted RBP16.29■□□□□ 0.2
CAPN3-209ENST00000466222 MTFR2Q6P444 385 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 CFAP77Q6ZQR2 320 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 NLRC3Q7RTR2 1065 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 ZNF100Q8IYN0 542 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 CNEP1R1Q8N9A8 125 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 FAM57AQ8TBR7 257 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 WNT2BQ93097 391 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 C4orf45Q96LM5 186 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 ZNF416Q9BWM5 594 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 OR10A4Q9H209 315 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 SLC17A5Q9NRA2 495 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 SH3BGRL2Q9UJC5 107 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 TUBAL3A6NHL2 446 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 ARPC1BO15143 372 aaKnown RBP16.29■□□□□ 0.2
CAPN3-209ENST00000466222 RER1O15258 196 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 ICMTO60725 284 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 HRGP04196 525 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 GIPP09681 153 aaPredicted RBP16.29■□□□□ 0.2
CAPN3-209ENST00000466222 PATE4P0C8F1 98 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 KIR2DL2P43627 348 aaPredicted RBP16.29■□□□□ 0.2
CAPN3-209ENST00000466222 SOX2P48431 317 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 CLDN12P56749 244 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 GUSBP1Q15486 140 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 VWA1Q6PCB0 445 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 FAM214BQ7L5A3 538 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 DOLPP1Q86YN1 238 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 SERPINA12Q8IW75 414 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 CCDC28AQ8IWP9 274 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 UXS1Q8NBZ7 420 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 NAXEQ8NCW5 288 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 OR10H5Q8NGA6 315 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 OR2T35Q8NGX2 323 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 ST7LQ8TDW4 575 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 MS4A3Q96HJ5 214 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 CNTNAP3BQ96NU0 1288 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 CNTNAP3Q9BZ76 1288 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 MRPL15Q9P015 296 aaKnown RBP16.29■□□□□ 0.2
CAPN3-209ENST00000466222 EIF3KQ9UBQ5 218 aaKnown RBP16.29■□□□□ 0.2
CAPN3-209ENST00000466222 CREBL2O60519 120 aaPredicted RBP16.28■□□□□ 0.2
CAPN3-209ENST00000466222 MAGEB1P43366 347 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 ZNF81P51508 661 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 AP2S1P53680 142 aaPredicted RBP16.28■□□□□ 0.2
CAPN3-209ENST00000466222 SSBP1Q04837 148 aaKnown RBP16.28■□□□□ 0.2
CAPN3-209ENST00000466222 ENDOGQ14249 297 aaKnown RBP16.28■□□□□ 0.2
CAPN3-209ENST00000466222 TMEM255AQ5JRV8 349 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 CLLU1Q5K131 121 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 SLC18B1Q6NT16 456 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 OR10S1Q8NGN2 331 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 OR8B4Q96RC9 309 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 METTL17Q9H7H0 456 aaPredicted RBP16.28■□□□□ 0.2
CAPN3-209ENST00000466222 KLK11Q9UBX7 282 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 UBQLN2Q9UHD9 624 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 USP24Q9UPU5 2620 aa16.28■□□□□ 0.2
CAPN3-209ENST00000466222 RBBP9O75884 186 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 CSF1P09603 554 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 NR2C1P13056 603 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 RAP2BP61225 183 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 RIPPLY2Q5TAB7 128 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 ZNF626Q68DY1 528 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 FGFBP3Q8TAT2 258 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 CPT1CQ8TCG5 803 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 TMEM106AQ96A25 262 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 FOXB1Q99853 325 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 NELFAQ9H3P2 528 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 TMEM38BQ9NVV0 291 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 UPB1Q9UBR1 384 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 FLVCR2Q9UPI3 526 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 POLR1DQ9Y2S0 133 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 SVILO95425 2214 aa16.27■□□□□ 0.2
CAPN3-209ENST00000466222 A0A096LPE4 126 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 A0A1W2PPZ6 126 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 H7C417 338 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 MSR1P21757 451 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF84P51523 738 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 ARPC4P59998 168 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 TEX30Q5JUR7 227 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 ANKRD16Q6P6B7 361 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 Q6ZTK2 550 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 FOXL2NBQ6ZUU3 175 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 OR8H3Q8N146 312 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 FBXO17Q96EF6 278 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 TMPRSS13Q9BYE2 586 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 CENPMQ9NSP4 180 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 MGAT4CQ9UBM8 478 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 MTFP1Q9UDX5 166 aa16.27■□□□□ 0.19
CAPN3-209ENST00000466222 GDF2Q9UK05 429 aaPredicted RBP16.27■□□□□ 0.19
CAPN3-209ENST00000466222 MBD3L4A6NDZ8 208 aaPredicted RBP16.26■□□□□ 0.19
CAPN3-209ENST00000466222 MBD3L3A6NE82 208 aaPredicted RBP16.26■□□□□ 0.19
CAPN3-209ENST00000466222 MBD3L5A6NJ08 208 aaPredicted RBP16.26■□□□□ 0.19
CAPN3-209ENST00000466222 FIGNL2A6NMB9 653 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 SHOXO15266 292 aa16.26■□□□□ 0.19
CAPN3-209ENST00000466222 GUCA1AP43080 201 aaPredicted RBP16.26■□□□□ 0.19
CAPN3-209ENST00000466222 ARF1P84077 181 aaKnown RBP16.26■□□□□ 0.19
CAPN3-209ENST00000466222 KCNMB1Q16558 191 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms