RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SLC25A16P16260 332 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 TGM4P49221 684 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 WNT4P56705 351 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 OR12D2P58182 307 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 SNRPD2P62316 118 aaKnown RBP14.93□□□□□ -0.02
CPSF4-209ENST00000465132 BDH1Q02338 343 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 EFNB3Q15768 340 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 RFPL4BQ6ZWI9 263 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 RFLNBQ8N5W9 214 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 NANOGP1Q8N7R0 232 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 MRPL24Q96A35 216 aaKnown RBP14.93□□□□□ -0.02
CPSF4-209ENST00000465132 PBOV1Q9GZY1 135 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 COMMD4Q9H0A8 199 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 OR51B6Q9H340 312 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 VCX3AQ9NNX9 186 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 BRD7Q9NPI1 651 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 FAM206AQ9NX38 181 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 N6AMT1Q9Y5N5 214 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 PLCE1Q9P212 2302 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 PHF1O43189 567 aaPredicted RBP14.92□□□□□ -0.02
CPSF4-209ENST00000465132 NGFP01138 241 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 C21orf33P30042 268 aaPredicted RBP14.92□□□□□ -0.02
CPSF4-209ENST00000465132 MVKQ03426 396 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 TMEM244Q5VVB8 128 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 RPL22L1Q6P5R6 122 aaKnown RBP14.92□□□□□ -0.02
CPSF4-209ENST00000465132 COMMD2Q86X83 199 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 ELMOD2Q8IZ81 293 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 SLC25A40Q8TBP6 338 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 KLF14Q8TD94 323 aaPredicted RBP14.92□□□□□ -0.02
CPSF4-209ENST00000465132 FAM168AQ92567 244 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 FCGR1BQ92637 280 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 HAVCR1Q96D42 359 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 MARS2Q96GW9 593 aaKnown RBP14.92□□□□□ -0.02
CPSF4-209ENST00000465132 SIGLEC11Q96RL6 698 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 OR2J1Q9GZK6 312 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 SLC22A4Q9H015 551 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 ACOXLQ9NUZ1 547 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 TMEM160Q9NX00 188 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 ERVK-18Q9QC07 812 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 DUSP13Q9UII6 198 aa14.92□□□□□ -0.02
CPSF4-209ENST00000465132 A0A1W2PPW3 197 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 TMEM212A6NML5 194 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 IGHV3-13P01766 116 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 EFNA4P52798 201 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 ADIPOQQ15848 244 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 CATSPERDQ86XM0 798 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 CSNK2A3Q8NEV1 391 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 C10orf105Q8TEF2 133 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 SPRYD4Q8WW59 207 aaPredicted RBP14.91□□□□□ -0.02
CPSF4-209ENST00000465132 THRSPQ92748 146 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 RORBQ92753 470 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 SPSB4Q96A44 273 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 PELI1Q96FA3 418 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 REEP6Q96HR9 211 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 DIRC2Q96SL1 478 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 MS4A5Q9H3V2 200 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 PTTG3PQ9NZH4 202 aa14.91□□□□□ -0.02
CPSF4-209ENST00000465132 IGLV3-9A0A075B6K5 115 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 TRBV2A0A0J9YWF9 115 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 A0A1B0GVI7 797 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 GGT3PA6NGU5 568 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 TIMM8AO60220 97 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-209ENST00000465132 CSF3P09919 207 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 SLC2A1P11166 492 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 KITLGP21583 273 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 MAP2K3P46734 347 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 MZT1Q08AG7 82 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 ACSM1Q08AH1 577 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 ALKBH1Q13686 389 aaKnown RBP14.9□□□□□ -0.02
CPSF4-209ENST00000465132 GK2Q14410 553 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-209ENST00000465132 SPHARQ15513 63 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 TBCEQ15813 527 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-209ENST00000465132 NKPD1Q17RQ9 610 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 CYB5R2Q6BCY4 276 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF773Q6PK81 442 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 DOK3Q7L591 496 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 PRSS45Q7RTY3 260 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 NAA40Q86UY6 237 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF676Q8N7Q3 588 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 OR2G2Q8NGZ5 317 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF649Q9BS31 505 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 BEX2Q9BXY8 128 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 ABCB9Q9NP78 766 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 DYNLRB1Q9NP97 96 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 ISYNA1Q9NPH2 558 aa14.9□□□□□ -0.02
CPSF4-209ENST00000465132 A0A087WXM4 84 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 LOC390937A0A1W2PQ73 354 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 DHRS7CA6NNS2 312 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 PRR32B1ATL7 298 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 MAGEB4O15481 346 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-209ENST00000465132 SRSF10O75494 262 aaKnown RBP14.89□□□□□ -0.03
CPSF4-209ENST00000465132 IGHV4-31P0DP07 118 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 USF1P22415 310 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-209ENST00000465132 MED22Q15528 200 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 GFOD2Q3B7J2 385 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 SNAI3Q3KNW1 292 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 FAM209AQ5JX71 171 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 GLYATL3Q5SZD4 288 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 SPATA46Q5T0L3 261 aa14.89□□□□□ -0.03
CPSF4-209ENST00000465132 KLBQ86Z14 1044 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms