RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 RAB1AP62820 205 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 ZP4Q12836 540 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 EIF3IQ13347 325 aaKnown RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 SQSTM1Q13501 440 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 DEFB115Q30KQ5 88 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 TMEM196Q5HYL7 178 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 PLAC9Q5JTB6 97 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 KLHL24Q6TFL4 600 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 ETV3LQ6ZN32 361 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 COX15Q7KZN9 410 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 GRINAQ7Z429 371 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 ZNF761Q86XN6 746 aaPredicted RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 YAF2Q8IY57 180 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 FAM71E2Q8N5Q1 922 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 AVL9Q8NBF6 648 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 UBAC2Q8NBM4 344 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 OR9K2Q8NGE7 335 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 SLC37A2Q8TED4 501 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 PTPMT1Q8WUK0 201 aaPredicted RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 ADIPOR1Q96A54 375 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 CAPNS2Q96L46 248 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 C1orf147Q96MC9 270 aaPredicted RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 ZNF285Q96NJ3 590 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 ADOQ96SZ5 270 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 NICN1Q9BSH3 213 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 SCRT1Q9BWW7 348 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 RTN4RQ9BZR6 473 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 PBOV1Q9GZY1 135 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 RGCCQ9H4X1 137 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 PTGES2Q9H7Z7 377 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 MOB1AQ9H8S9 216 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 PLEKHA2Q9HB19 425 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 FAM212BQ9NTI7 297 aaPredicted RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 FBXL17Q9UF56 701 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 B3GALT5Q9Y2C3 310 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 MRPS28Q9Y2Q9 187 aaKnown RBP6.47□□□□□ -1.37
USP48-206ENST00000464577 PDE4DIPQ5VU43 2346 aa6.47□□□□□ -1.37
USP48-206ENST00000464577 A0A1W2PPH5 198 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 FTCDNL1E5RQL4 147 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 AGPAT2O15120 278 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 PPIHO43447 177 aaKnown RBP6.46□□□□□ -1.37
USP48-206ENST00000464577 PRKNO60260 465 aaPredicted RBP6.46□□□□□ -1.37
USP48-206ENST00000464577 DEDDO75618 318 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 RAD51DO75771 328 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 TSPAN15O95858 294 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 TNFP01375 233 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 SEC11BP0C7V7 166 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 ZNF20P17024 532 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 AMY2BP19961 511 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 IL12BP29460 328 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 RPL12P30050 165 aaKnown RBP6.46□□□□□ -1.37
USP48-206ENST00000464577 FCGR2CP31995 323 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 RAB5CP51148 216 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 AADACL3Q5VUY0 350 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 POMZP3Q6PJE2 187 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 GLIPR1L1Q6UWM5 242 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 HIST2H3AQ71DI3 136 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 RTN4RL2Q86UN3 420 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 LINC00346Q8IVM7 164 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 ZNF101Q8IZC7 436 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 ZNF321PQ8N8H1 164 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 OR56B1Q8NGI3 324 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 OR1J1Q8NGS3 322 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 OR13C9Q8NGT0 318 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 EDARADDQ8WWZ3 215 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 KCNK17Q96T54 332 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 MESP1Q9BRJ9 268 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 CRISPLD2Q9H0B8 497 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 TUBD1Q9UJT1 453 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 MMACHCQ9Y4U1 282 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 DMRT1Q9Y5R6 373 aa6.46□□□□□ -1.37
USP48-206ENST00000464577 BRCA2P51587 3418 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 A0A1B0GW64 132 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 A0A1W2PQF6 199 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 ZNF729A6NN14 1252 aaPredicted RBP6.46□□□□□ -1.38
USP48-206ENST00000464577 NPIPA5E9PKD4 350 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 H0YIG0 161 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 SOCS1O15524 211 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 TSPAN2O60636 221 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 MPIG6BO95866 241 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 IFNA2P01563 188 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 IFNA17P01571 189 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 IGKV3-11P04433 115 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 SNRNP70P08621 437 aaKnown RBP6.46□□□□□ -1.38
USP48-206ENST00000464577 DANCRP0C864 163 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 COL9A1P20849 921 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 LMO1P25800 156 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 AKT2P31751 481 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 RBMXP38159 391 aaKnown RBP6.46□□□□□ -1.38
USP48-206ENST00000464577 AKR1C3P42330 323 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 SPEM2Q0P670 501 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 GUK1Q16774 197 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 IAH1Q2TAA2 248 aaPredicted RBP6.46□□□□□ -1.38
USP48-206ENST00000464577 AKIRIN2Q53H80 203 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 ACER2Q5QJU3 275 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 OR2A2Q6IF42 318 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 GKN2Q86XP6 184 aa6.46□□□□□ -1.38
USP48-206ENST00000464577 OR5AS1Q8N127 324 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms