RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TRMT5Q32P41 509 aaKnown RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 TMEM31Q5JXX7 168 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 NANOGP8Q6NSW7 305 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 CNIH2Q6PI25 160 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 ABHD13Q7L211 337 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 UNC93AQ86WB7 457 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 ZNF738Q8NE65 137 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 ATP6V1C2Q8NEY4 427 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 OR1S2Q8NGQ3 325 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 OR2G2Q8NGZ5 317 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 GEMIN6Q8WXD5 167 aaKnown RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 TFGQ92734 400 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 OR8B4Q96RC9 309 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 SORT1Q99523 831 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 CIB1Q99828 191 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 SELENOSQ9BQE4 189 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 RETNQ9HD89 108 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 TREX1Q9NSU2 369 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 VAPAQ9P0L0 249 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 OPN4Q9UHM6 478 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 LGALS13Q9UHV8 139 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 YTHDF2Q9Y5A9 579 aaKnown RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 TSSC4Q9Y5U2 329 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 IGLV3-22A0A075B6J6 115 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 OR6C70A6NIJ9 312 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 SEC14L6B5MCN3 397 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 H3BN98 237 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 KLRC4-KLRK1H3BQV0 150 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 SMLR1H3BR10 107 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 FOXH1O75593 365 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 RBBP9O75884 186 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 DEXIO95424 95 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 CLIC3O95833 236 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 SERPINA6P08185 405 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 GFAPP14136 432 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 CTRB1P17538 263 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 RBM34P42696 430 aaKnown RBP3.3□□□□□ -1.88
PTCD3-205ENST00000464541 CDKN2CP42773 168 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 RGS6P49758 472 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 GDI2P50395 445 aaKnown RBP3.3□□□□□ -1.88
PTCD3-205ENST00000464541 CCR8P51685 355 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 STXBP1P61764 594 aaKnown RBP3.3□□□□□ -1.88
PTCD3-205ENST00000464541 SLC35B1P78383 322 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 KDSRQ06136 332 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 GABRA6Q16445 453 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 GOLGA7BQ2TAP0 167 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 DUPD1Q68J44 220 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 ANKRD26P1Q6NSI1 321 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 TRIM40Q6P9F5 258 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 ASCL5Q7RTU5 278 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 TMEM135Q86UB9 458 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 LRRC34Q8IZ02 419 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 ZNF557Q8N988 423 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-205ENST00000464541 OR5B3Q8NH48 314 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 ZNF502Q8TBZ5 544 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 ZNF721Q8TF20 911 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 CPNE4Q96A23 557 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-205ENST00000464541 SH3GL3Q99963 347 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 MICU1Q9BPX6 476 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 RTBDNQ9BSG5 229 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-205ENST00000464541 C9orf16Q9BUW7 83 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 POTEKPQ9BYX7 375 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 DERL2Q9GZP9 239 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 BEX1Q9HBH7 125 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 AGPAT4Q9NRZ5 378 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 IMP3Q9NV31 184 aaKnown RBP3.3□□□□□ -1.88
PTCD3-205ENST00000464541 C1orf109Q9NX04 203 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 SCML1Q9UN30 329 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 RCL1Q9Y2P8 373 aaKnown RBP3.3□□□□□ -1.88
PTCD3-205ENST00000464541 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
PTCD3-205ENST00000464541 PLB1Q6P1J6 1458 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 A0A0B4J2A0 478 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 AQP9O43315 295 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 TNFAIP8O95379 198 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 IGHV2-5P01817 119 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 ACSM4P0C7M7 580 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 CALM1P0DP23 149 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 CALM2P0DP24 149 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 CALM3P0DP25 149 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 MSNP26038 577 aaKnown RBP3.29□□□□□ -1.88
PTCD3-205ENST00000464541 RFC3P40938 356 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 ACTR1BP42025 376 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 B2MP61769 119 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 REEP5Q00765 189 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 ECH1Q13011 328 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 CASP8Q14790 479 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 DNAL1Q4LDG9 190 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 ABCA11PQ4W5N1 156 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 COQ5Q5HYK3 327 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 FAHD1Q6P587 224 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 FAM92BQ6ZTR7 304 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 LINC00336Q6ZUF6 198 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 BBS7Q8IWZ6 715 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 MREGQ8N565 214 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 C15orf56Q8N910 161 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 OR5AK3PQ8NH89 298 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 SDR42E1Q8WUS8 393 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 BAALCQ8WXS3 180 aa3.29□□□□□ -1.88
PTCD3-205ENST00000464541 ESR2Q92731 530 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms