RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MFGE8Q08431 387 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 OR8G1Q15617 311 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 KCTD20Q7Z5Y7 419 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 BIVMQ86UB2 503 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 C8orf59Q8N0T1 100 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 TFAP2CQ92754 450 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 MEGF10Q96KG7 1140 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 LYZL4Q96KX0 146 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 SMR3AQ99954 134 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 VCX3BQ9H321 246 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 MOB1AQ9H8S9 216 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 G6PC2Q9NQR9 355 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 GNG8Q9UK08 70 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 OR52A1Q9UKL2 312 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 DYSFO75923 2080 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 IGHV4-61A0A0C4DH41 118 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 FAM20BO75063 409 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 ATP6V1G2O95670 118 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 TACSTD2P09758 323 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 AQP4P55087 323 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 OR8B8Q15620 311 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 SNCBQ16143 134 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 CDONQ4KMG0 1287 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 TP53I3Q53FA7 332 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 BCL2L15Q5TBC7 163 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 FAM220AQ7Z4H9 259 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 COMMD2Q86X83 199 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 KLBQ86Z14 1044 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 ELMOD2Q8IZ81 293 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 FTMTQ8N4E7 242 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 CELF2-AS1Q8N7Q2 184 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 CSNK2A3Q8NEV1 391 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 OR52I1Q8NGK6 324 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 OR51E1Q8TCB6 317 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 RORBQ92753 470 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 MYCBPQ99417 103 aaPredicted RBP12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 SOX7Q9BT81 388 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 GSX1Q9H4S2 264 aaPredicted RBP12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 INPP5EQ9NRR6 644 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 PPP1R3CQ9UQK1 317 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 MYRFQ9Y2G1 1151 aa12.28□□□□□ -0.44
SQSTM1-205ENST00000464493 CLDN25C9JDP6 229 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 IGLV3-1P01715 115 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 IGHA1P01876 353 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 TTRP02766 147 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 ACKR3P25106 362 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 CD200P41217 278 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 MAP2K3P46734 347 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 OR12D2P58182 307 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 SLC3A1Q07837 685 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 MAB21L1Q13394 359 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 GALEQ14376 348 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 C6orf52Q5T4I8 152 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 CLEC9AQ6UXN8 241 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 LHFPL3Q86UP9 236 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 SPERTQ8NA61 448 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 ITFG2Q969R8 447 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 MRPL48Q96GC5 212 aaKnown RBP12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 ADAT1Q9BUB4 502 aaKnown RBP12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 ALG8Q9BVK2 526 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 FGF20Q9NP95 211 aaPredicted RBP12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 GPR84Q9NQS5 396 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 ACOXLQ9NUZ1 547 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 SLC22A13Q9Y226 551 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 RHBDD3Q9Y3P4 386 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 CSPG4Q6UVK1 2322 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 YLPM1P49750 1951 aaKnown RBP12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 TANC2Q9HCD6 1990 aa12.27□□□□□ -0.45
SQSTM1-205ENST00000464493 MTORP42345 2549 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 IGHV3-64DA0A0J9YX35 117 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 IRGMA1A4Y4 181 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 J3QLW9 94 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 LY6G6DO95868 133 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 ATP6V1B1P15313 513 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 ZNF19P17023 458 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 GNALP38405 381 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 CHN2P52757 468 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 ACTA2P62736 377 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 ACTG2P63267 376 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 MZT1Q08AG7 82 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 THAP5Q7Z6K1 395 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 CATSPERDQ86XM0 798 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 EGFL6Q8IUX8 553 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 FBLIM1Q8WUP2 373 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 RAB1CQ92928 201 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 DVL3Q92997 716 aaPredicted RBP12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 TIMD4Q96H15 378 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 FAM71F1Q96KD3 344 aaPredicted RBP12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 ZNF649Q9BS31 505 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 PAPOLGQ9BWT3 736 aaKnown RBP12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 TMEM106BQ9NUM4 274 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 ERVK13-1Q9NX77 482 aa12.26□□□□□ -0.45
SQSTM1-205ENST00000464493 TLN2Q9Y4G6 2542 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 IFNL4K9M1U5 179 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 P2RY10O00398 339 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 MTRF1O75570 445 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms