RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 OR2T4Q8NH00 348 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 GNPDA2Q8TDQ7 276 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 COPS4Q9BT78 406 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 EGLN3Q9H6Z9 239 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 DUX4Q9UBX2 424 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 N6AMT1Q9Y5N5 214 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 TSPAN15O95858 294 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 RRM2P31350 389 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 PCK2Q16822 640 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 PGBD2Q6P3X8 592 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 WDR86Q86TI4 376 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 SPSB4Q96A44 273 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 CMTM5Q96DZ9 223 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 CCL13Q99616 98 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 KCNJ15Q99712 375 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 SEMA6AQ9H2E6 1030 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 C16orf95Q9H693 158 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 OPA3Q9H6K4 179 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 RNPEPL1Q9HAU8 725 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 CENPMQ9NSP4 180 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 FAM96BQ9Y3D0 163 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 COMMD3-BMI1R4GMX3 469 aa18.61■□□□□ 0.57
USP4-208ENST00000464168 A0A1B0GVI7 797 aa18.6■□□□□ 0.57
USP4-208ENST00000464168 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.6■□□□□ 0.57
USP4-208ENST00000464168 MUC1P15941 1255 aaPredicted RBP18.6■□□□□ 0.57
USP4-208ENST00000464168 DDOSTP39656 456 aa18.6■□□□□ 0.57
USP4-208ENST00000464168 MICBQ29980 383 aa18.6■□□□□ 0.57
USP4-208ENST00000464168 ZDHHC21Q8IVQ6 265 aa18.6■□□□□ 0.57
USP4-208ENST00000464168 OR4C15Q8NGM1 316 aa18.6■□□□□ 0.57
USP4-208ENST00000464168 LRRC29Q8WV35 223 aa18.6■□□□□ 0.57
USP4-208ENST00000464168 SLAMF6Q96DU3 332 aa18.6■□□□□ 0.57
USP4-208ENST00000464168 CDH10Q9Y6N8 788 aa18.6■□□□□ 0.57
USP4-208ENST00000464168 ANKRD30BLA7E2S9 258 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 XRCC2O43543 280 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 SPARCP09486 303 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 TAF13Q15543 124 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 WDR38Q5JTN6 314 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 METAP1DQ6UB28 335 aaPredicted RBP18.59■□□□□ 0.57
USP4-208ENST00000464168 ZNF511Q8NB15 262 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 OR9Q1Q8NGQ5 310 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 OR8S1Q8NH09 359 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 LRTOMTQ8WZ04 291 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 MCUR1Q96AQ8 359 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 SEH1LQ96EE3 360 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 MYLK2Q9H1R3 596 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 ONECUT1Q9UBC0 465 aa18.59■□□□□ 0.57
USP4-208ENST00000464168 ZNF593O00488 134 aaPredicted RBP18.58■□□□□ 0.56
USP4-208ENST00000464168 FABP3P05413 133 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 GRK5P34947 590 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 ENTPD1P49961 510 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 CSNK2BP67870 215 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 FAM3AP98173 230 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 PRB3Q04118 309 aaPredicted RBP18.58■□□□□ 0.56
USP4-208ENST00000464168 WDR82Q6UXN9 313 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 SLC16A9Q7RTY1 509 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 DPY19L4Q7Z388 723 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 C1QL4Q86Z23 238 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 FAM216BQ8N7L0 139 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 SLC37A3Q8NCC5 494 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 OR1M1Q8NGA1 313 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 OR52L1Q8NGH7 329 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 NPRL2Q8WTW4 380 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 SGK3Q96BR1 496 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 DMRTB1Q96MA1 342 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 IL1RAPQ9NPH3 570 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 IL20Q9NYY1 176 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 ZNRD1Q9P1U0 126 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 CD300AQ9UGN4 299 aa18.58■□□□□ 0.56
USP4-208ENST00000464168 TSPAN9O75954 239 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 FBP1P09467 338 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 AMY2BP19961 511 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 FMO3P31513 532 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 MSX2P35548 267 aaPredicted RBP18.57■□□□□ 0.56
USP4-208ENST00000464168 TEX30Q5JUR7 227 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 DHRS7BQ6IAN0 325 aaPredicted RBP18.57■□□□□ 0.56
USP4-208ENST00000464168 RPL13AP3Q6NVV1 102 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 Q8N7P7 452 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 OR8D4Q8NGM9 314 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 FAM110DQ8TAY7 271 aaPredicted RBP18.57■□□□□ 0.56
USP4-208ENST00000464168 PPP1R3EQ9H7J1 279 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 SIRT7Q9NRC8 400 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 MAGEL2Q9UJ55 1249 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 VPREB3Q9UKI3 123 aa18.57■□□□□ 0.56
USP4-208ENST00000464168 ZNF816-ZNF321PA0A0X1KG74 233 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 ZNF878C9JN71 531 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 RNASEK-C17orf49H0YIS7 233 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 ACOT8O14734 319 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 TBX1O43435 398 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 GYPBP06028 91 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 HSD17B1P14061 328 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 TGM4P49221 684 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 HMGA2P52926 109 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 DLX1P56177 255 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 SLC36A1Q7Z2H8 476 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 OR9Q2Q8NGE9 314 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 C12orf43Q96C57 262 aaKnown RBP18.56■□□□□ 0.56
USP4-208ENST00000464168 BTBD10Q9BSF8 475 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 NMNAT2Q9BZQ4 307 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 DNAJB11Q9UBS4 358 aa18.56■□□□□ 0.56
USP4-208ENST00000464168 PRPF19Q9UMS4 504 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms