RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 SCML1Q9UN30 329 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 HYOU1Q9Y4L1 999 aa2.72□□□□□ -1.97
USH2A-203ENST00000463147 CDC42BPBQ9Y5S2 1711 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 A6NDX4 124 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 C11orf94C9JXX5 98 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 F8VP50 259 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 H0Y9J4 135 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 CETN3O15182 167 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 RP2O75695 350 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 IGKV1D-16P01601 117 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 BCHEP06276 602 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 TCN2P20062 427 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 ARL2P36404 184 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 P2RY2P41231 377 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 RBM34P42696 430 aaKnown RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 CDKN2DP55273 166 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 UBE2NP61088 152 aaKnown RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 CKAP4Q07065 602 aaKnown RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 ST3GAL4Q11206 333 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 SLAMF1Q13291 335 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 OR1Q1Q15612 314 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 ZBTB6Q15916 424 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 FAM27D1Q5T7N8 215 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 ZNF429Q86V71 674 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 ERO1BQ86YB8 467 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 KRTAP11-1Q8IUC1 163 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 Q8N976 141 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 Q8N9W7 124 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 OR10G4Q8NGN3 311 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 ANGPTL6Q8NI99 470 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 PIFOQ8TCI5 191 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 RXFP2Q8WXD0 754 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 ANP32BQ92688 251 aaKnown RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 PHYHIPLQ96FC7 376 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 NANOGQ9H9S0 305 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 WFDC1Q9HC57 220 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 MYOZ1Q9NP98 299 aaPredicted RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 OR2S2Q9NQN1 319 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 DDIT4Q9NX09 232 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 RBAKQ9NYW8 714 aaPredicted RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 CHMP5Q9NZZ3 219 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 NOSIPQ9Y314 301 aaKnown RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 SIGLEC9Q9Y336 463 aa2.71□□□□□ -1.98
USH2A-203ENST00000463147 GPATCH8Q9UKJ3 1502 aaKnown RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 ZNF608Q9ULD9 1512 aaPredicted RBP2.71□□□□□ -1.98
USH2A-203ENST00000463147 IGHV2OR16-5A0A0B4J2B6 119 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 IGHV1-69DA0A0B4J2H0 117 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 SEC14L6B5MCN3 397 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 E7EWF7 191 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 RNASEK-C17orf49H0YIS7 233 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 hCG_2039718K7EN88 272 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 DNASE2O00115 360 aaPredicted RBP2.7□□□□□ -1.98
USH2A-203ENST00000463147 SCN2BO60939 215 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 GP1BAP07359 652 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 HOXA9P31269 272 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 SPAM1P38567 509 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 MAGEA6P43360 314 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 TAS2R46P59540 309 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 UBE2KP61086 200 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 MADCAM1Q13477 382 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 RBMY1FQ15415 496 aaKnown RBP2.7□□□□□ -1.98
USH2A-203ENST00000463147 ZNF530Q6P9A1 599 aaPredicted RBP2.7□□□□□ -1.98
USH2A-203ENST00000463147 NKAIN4Q8IVV8 208 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 SLC30A8Q8IWU4 369 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 CD302Q8IX05 232 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 OR2Y1Q8NGV0 311 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 HAUS1Q96CS2 278 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 ADTRPQ96IZ2 230 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 CHMP4BQ9H444 224 aaKnown RBP2.7□□□□□ -1.98
USH2A-203ENST00000463147 TMEM27Q9HBJ8 222 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 VCX3AQ9NNX9 186 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 TREX1Q9NSU2 369 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 TMEM100Q9NV29 134 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 EURLQ9NYK6 297 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 CD300AQ9UGN4 299 aa2.7□□□□□ -1.98
USH2A-203ENST00000463147 NUFIP1Q9UHK0 495 aaKnown RBP2.7□□□□□ -1.98
USH2A-203ENST00000463147 TRMT112Q9UI30 125 aaKnown RBP2.7□□□□□ -1.98
USH2A-203ENST00000463147 EEA1Q15075 1411 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 TRPC5OSA6NMA1 111 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 INS-IGF2F8WCM5 200 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 SMLR1H3BR10 107 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 ENSAO43768 121 aaKnown RBP2.69□□□□□ -1.98
USH2A-203ENST00000463147 CA11O75493 328 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 TRBV12-3P01733 135 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 PRB2P02812 416 aaPredicted RBP2.69□□□□□ -1.98
USH2A-203ENST00000463147 HLA-DPB1P04440 258 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 PNMA6AP0CW24 399 aaPredicted RBP2.69□□□□□ -1.98
USH2A-203ENST00000463147 TEAD1P28347 426 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 SSTR5P35346 364 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 HTR2BP41595 481 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 PPOXP50336 477 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 GFERP55789 205 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 SYNJ2BPP57105 145 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 TAS2R60P59551 318 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 RPL23P62829 140 aaKnown RBP2.69□□□□□ -1.98
USH2A-203ENST00000463147 PMS2P3Q13401 168 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 GINS1Q14691 196 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 ANGPT1Q15389 498 aa2.69□□□□□ -1.98
USH2A-203ENST00000463147 USF2Q15853 346 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms