RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CEACAM19Q7Z692 300 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
COL6A1-202ENST00000463060 PARP16Q8N5Y8 322 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 CMBLQ96DG6 245 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 ADAT3Q96EY9 351 aaPredicted RBP12.31□□□□□ -0.44
COL6A1-202ENST00000463060 FAM71F1Q96KD3 344 aaPredicted RBP12.31□□□□□ -0.44
COL6A1-202ENST00000463060 OR14A2Q96R54 314 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF442Q9H7R0 627 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 SSR3Q9UNL2 185 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 PLCE1Q9P212 2302 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 SPTAN1Q13813 2472 aaKnown RBP12.3□□□□□ -0.44
COL6A1-202ENST00000463060 IGLV3-9A0A075B6K5 115 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 SMIM31A0A1B0GVY4 71 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 TRIM64BA6NI03 449 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 PRSS44E7EML9 344 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 E7EQL1 145 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 H3BSH0 61 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 AIREO43918 545 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 MTRF1O75570 445 aaKnown RBP12.3□□□□□ -0.44
COL6A1-202ENST00000463060 CD3EP07766 207 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 OCM2P0CE71 109 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 KITLGP21583 273 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 DDOSTP39656 456 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 MAP2K3P46734 347 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 PRSS12P56730 875 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 PSG7Q13046 419 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF718Q3SXZ3 478 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 TIMM50Q3ZCQ8 353 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 ZBTB37Q5TC79 503 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 FOXB2Q5VYV0 432 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 ADAM5Q6NVV9 412 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF529Q6P280 563 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 SLC22A25Q6T423 547 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 PGAP1Q75T13 922 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 CLVS1Q8IUQ0 354 aaPredicted RBP12.3□□□□□ -0.44
COL6A1-202ENST00000463060 OR13C3Q8NGS6 347 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF420Q8TAQ5 688 aaPredicted RBP12.3□□□□□ -0.44
COL6A1-202ENST00000463060 FGGYQ96C11 551 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 C10orf35Q96D05 121 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 BCL7BQ9BQE9 202 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 CHCHD6Q9BRQ6 235 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 CENPOQ9BU64 300 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 RNF167Q9H6Y7 350 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 NOX4Q9NPH5 578 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 NDUFA13Q9P0J0 144 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 DHDHQ9UQ10 334 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 RNF115Q9Y4L5 304 aa12.3□□□□□ -0.44
COL6A1-202ENST00000463060 A0A1B0GWJ7 208 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 SHISA3A0PJX4 238 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 CD300LBA8K4G0 201 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 IQCF6A8MYZ5 107 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 GOSR1O95249 250 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 IGHV3-13P01766 116 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 CD37P11049 281 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 IGFBP3P17936 291 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-202ENST00000463060 SOX2P48431 317 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 FABP6P51161 128 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 ALKBH6Q3KRA9 238 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 C22orf42Q6IC83 251 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 OR2T2Q6IF00 324 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 RGS7BPQ6MZT1 257 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-202ENST00000463060 PAMR1Q6UXH9 720 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 MRPL21Q7Z2W9 205 aaKnown RBP12.29□□□□□ -0.44
COL6A1-202ENST00000463060 LRP11Q86VZ4 500 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 SEMA6DQ8NFY4 1073 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 KBTBD8Q8NFY9 601 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 THRSPQ92748 146 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 TMEM106AQ96A25 262 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 ORAI1Q96D31 301 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 PIK3IP1Q96FE7 263 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 CA10Q9NS85 328 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 KCNN3Q9UGI6 736 aa12.29□□□□□ -0.44
COL6A1-202ENST00000463060 TRAV8-7A0A075B6U6 113 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 TRAV1-2A0A0B4J238 106 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 A0A1W2PPK0 400 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 A0A1W2PPR1 153 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 ANKRD61A6NGH8 418 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF701M0R085 212 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-202ENST00000463060 LILRA1O75019 489 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 ALX3O95076 343 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 CST4P01036 141 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 FAHP16930 419 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 FSTP19883 344 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 MAPK3P27361 379 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-202ENST00000463060 TGFBR1P36897 503 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 RPS23P62266 143 aaKnown RBP12.28□□□□□ -0.44
COL6A1-202ENST00000463060 RIPPLY1Q0D2K3 151 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 ADIPOQQ15848 244 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 SP5Q6BEB4 398 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-202ENST00000463060 UTS2BQ765I0 119 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 COMMD2Q86X83 199 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 OR56B2PQ8NGI1 322 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 SYNPRQ8TBG9 265 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 RAB2BQ8WUD1 216 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 TSEN15Q8WW01 171 aaKnown RBP12.28□□□□□ -0.44
COL6A1-202ENST00000463060 NEUROG1Q92886 237 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 MRPL24Q96A35 216 aaKnown RBP12.28□□□□□ -0.44
COL6A1-202ENST00000463060 ISOC1Q96CN7 298 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 DGCR14Q96DF8 476 aaKnown RBP12.28□□□□□ -0.44
COL6A1-202ENST00000463060 PSMG3-AS1Q96PY0 264 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms