RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SMURF1Q9HCE7 757 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 NDE1Q9NXR1 346 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 CD300AQ9UGN4 299 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 BAIAP2Q9UQB8 552 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 RNF114Q9Y508 228 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 KPTNQ9Y664 436 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 COMMD3-BMI1R4GMX3 469 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 A0A1B0GVI7 797 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 ZNF593O00488 134 aaPredicted RBP12.73□□□□□ -0.37
SKA3-204ENST00000462482 GPR137BO60478 399 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 TIPRLO75663 272 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 CCNB2O95067 398 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 SLC2A1P11166 492 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 MUC1P15941 1255 aaPredicted RBP12.73□□□□□ -0.37
SKA3-204ENST00000462482 EEF1B2P24534 225 aaKnown RBP12.73□□□□□ -0.37
SKA3-204ENST00000462482 HOXA4Q00056 320 aaPredicted RBP12.73□□□□□ -0.37
SKA3-204ENST00000462482 CDONQ4KMG0 1287 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 TEX36Q5VZQ5 186 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 FAM90A1Q86YD7 464 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 PGAM4Q8N0Y7 254 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 FTMTQ8N4E7 242 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 GCSAMQ8N6F7 178 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 SLC37A3Q8NCC5 494 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 OR9Q1Q8NGQ5 310 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 OR6K6Q8NGW6 343 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 LRRC29Q8WV35 223 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 CDRT15Q96T59 188 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 CITED1Q99966 193 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 TSSK6Q9BXA6 273 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 TOR3AQ9H497 397 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 IL20Q9NYY1 176 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 PDP1Q9P0J1 537 aaPredicted RBP12.73□□□□□ -0.37
SKA3-204ENST00000462482 ONECUT1Q9UBC0 465 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 KAAG1Q9UBP8 84 aa12.73□□□□□ -0.37
SKA3-204ENST00000462482 IGHV3OR15-7A0A075B7D8 119 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 A0A0U1RQK1 487 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 ANXA2P2A6NMY6 339 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 GPR37O15354 613 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 NDUFB3O43676 98 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 IGHV4-59P01825 116 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 MSX2P35548 267 aaPredicted RBP12.72□□□□□ -0.37
SKA3-204ENST00000462482 CX3CR1P49238 355 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 MXRA7P84157 204 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 SRSF4Q08170 494 aaKnown RBP12.72□□□□□ -0.37
SKA3-204ENST00000462482 POU4F2Q12837 409 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 TEX30Q5JUR7 227 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 C16orf89Q6UX73 402 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 RASSF6Q6ZTQ3 369 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 PDZD9Q8IXQ8 264 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 OR2T33Q8NG76 320 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 OR9Q2Q8NGE9 314 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 NPRL2Q8WTW4 380 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 MICU1Q9BPX6 476 aa12.72□□□□□ -0.37
SKA3-204ENST00000462482 RPUSD1Q9UJJ7 312 aaKnown RBP12.72□□□□□ -0.37
SKA3-204ENST00000462482 RIIAD1A6NNX1 92 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 LHBP01229 141 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 FBP1P09467 338 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 IER3P46695 156 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 SLC25A1P53007 311 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 RELBQ01201 579 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 IL5RAQ01344 420 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 GUCA2AQ02747 115 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 CRMP1Q14194 572 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 EIF2B1Q14232 305 aaKnown RBP12.71□□□□□ -0.37
SKA3-204ENST00000462482 GFOD2Q3B7J2 385 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 SPATS1Q496A3 300 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 LRRC10Q5BKY1 277 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 LYPD4Q6UWN0 246 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 SLC16A9Q7RTY1 509 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 VMO1Q7Z5L0 202 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 CPLX4Q7Z7G2 160 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 LDLRAD3Q86YD5 345 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 ZNF511Q8NB15 262 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 CSNK2A3Q8NEV1 391 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 OR52H1Q8NGJ2 320 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 SPSB4Q96A44 273 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 REEP6Q96HR9 211 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 DMRTB1Q96MA1 342 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 DDOQ99489 341 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 CCL13Q99616 98 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 OR10A2Q9H208 303 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 TCF7L1Q9HCS4 588 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 PRPF19Q9UMS4 504 aaKnown RBP12.71□□□□□ -0.37
SKA3-204ENST00000462482 LYVE1Q9Y5Y7 322 aa12.71□□□□□ -0.37
SKA3-204ENST00000462482 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 PAHP00439 452 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 GYPBP06028 91 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 ZNF3P17036 446 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 SPI1P17947 270 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 HMGA2P52926 109 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 TAF9Q16594 264 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 PCK2Q16822 640 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
SKA3-204ENST00000462482 AQP11Q8NBQ7 271 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 OR1M1Q8NGA1 313 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 LINC01006Q8NI28 216 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 ZNRF4Q8WWF5 429 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 C12orf43Q96C57 262 aaKnown RBP12.7□□□□□ -0.38
SKA3-204ENST00000462482 BTBD10Q9BSF8 475 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms