RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 C17orf107Q6ZR85 190 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 GPRIN3Q6ZVF9 776 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 GRINAQ7Z429 371 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 MDP1Q86V88 176 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 WDFY1Q8IWB7 410 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 CTAGE3PQ8IX95 158 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 CCDC36Q8IYA8 594 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 TMEM86BQ8N661 226 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 TMEM99Q8N816 258 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 CCDC63Q8NA47 563 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 SLC37A3Q8NCC5 494 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 LINC01006Q8NI28 216 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 TMEM237Q96Q45 408 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 ALKBH3Q96Q83 286 aaPredicted RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 MRPL57Q9BQC6 102 aaKnown RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 ZNF350Q9GZX5 532 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 WDR13Q9H1Z4 485 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 MAN2C1Q9NTJ4 1040 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 SLCO1C1Q9NYB5 712 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 POLR3HQ9Y535 204 aaPredicted RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 INSIG2Q9Y5U4 225 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 RYR1P21817 5038 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 A0A0B4J203 849 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 IGHV1-69-2A0A0G2JMI3 117 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 SRRM5B3KS81 715 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 H0YL77 283 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 FAAHO00519 579 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 NPIPB7O75200 414 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 SMIM24O75264 130 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 FOXH1O75593 365 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 CSTAP01040 98 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 IGHMP01871 453 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 OPN1MWP04001 364 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 OPN1MW2P0DN77 364 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 OPN1MW3P0DN78 364 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 ZNF26P17031 533 aaPredicted RBP3.88□□□□□ -1.79
COPS3-204ENST00000462236 ATP6V1C1P21283 382 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 HMOX2P30519 316 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 NKX2-1P43699 371 aaPredicted RBP3.88□□□□□ -1.79
COPS3-204ENST00000462236 OR3A3P47888 321 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 SERPINB8P50452 374 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 CCR4P51679 360 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 PKNOX1P55347 436 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 OR2B6P58173 313 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 LCN2P80188 198 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 DR1Q01658 176 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 ARMCX4Q5H9R4 360 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 OTUD3Q5T2D3 398 aaPredicted RBP3.88□□□□□ -1.79
COPS3-204ENST00000462236 ANKRD26P1Q6NSI1 321 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 NHLRC1Q6VVB1 395 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 SYT10Q6XYQ8 523 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 RNF165Q6ZSG1 346 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 AAED1Q7RTV5 226 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 ZNF584Q8IVC4 421 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 ADAD2Q8NCV1 583 aaKnown RBP3.88□□□□□ -1.79
COPS3-204ENST00000462236 MRAPQ8TCY5 172 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 SFXN5Q8TD22 340 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 ST6GALNAC6Q969X2 333 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 UPRTQ96BW1 309 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 TRIM44Q96DX7 344 aaPredicted RBP3.88□□□□□ -1.79
COPS3-204ENST00000462236 L3HYPDHQ96EM0 354 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 DNAJA3Q96EY1 480 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 KCNA7Q96RP8 456 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 FUT8Q9BYC5 575 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 REEP4Q9H6H4 257 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 RNF121Q9H920 327 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 EXOSC3Q9NQT5 275 aaKnown RBP3.88□□□□□ -1.79
COPS3-204ENST00000462236 KLHL21Q9UJP4 597 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 ZNF346Q9UL40 294 aaKnown RBP3.88□□□□□ -1.79
COPS3-204ENST00000462236 SNX12Q9UMY4 172 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 SNX24Q9Y343 169 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 TIMM22Q9Y584 194 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 AUP1Q9Y679 476 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 CACNG2Q9Y698 323 aa3.88□□□□□ -1.79
COPS3-204ENST00000462236 KMT2AQ03164 3969 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 A0A087WUV0 522 aaPredicted RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 TMED7-TICAM2A0A0A6YYA0 188 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 MDFIC2A0A1B0GVS7 189 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 ZNF99A8MXY4 864 aaPredicted RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 CLDN25C9JDP6 229 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 TM9SF1O15321 606 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 FCMRO60667 390 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 AKR7A3O95154 331 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 VAMP5O95183 116 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 AK1P00568 194 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 UBTFL6P0CB48 400 aaPredicted RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 SDC1P18827 310 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 IMPDH1P20839 514 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 CD80P33681 288 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 MAGEA4P43358 317 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 IER3P46695 156 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 CCT3P49368 545 aaKnown RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 RPS23P62266 143 aaKnown RBP3.87□□□□□ -1.79
COPS3-204ENST00000462236 CCL8P80075 99 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 FUT5Q11128 374 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 NPRL3Q12980 569 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 ARHGAP11BQ3KRB8 267 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 TMEM255AQ5JRV8 349 aa3.87□□□□□ -1.79
COPS3-204ENST00000462236 ADAMTSL4-AS1Q5T5F5 129 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms