RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 OR52D1Q9H346 318 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 WDR55Q9H6Y2 383 aaPredicted RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 REEP1Q9H902 201 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 NECAP2Q9NVZ3 263 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 CES1P1Q9UKY3 287 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF257Q9Y2Q1 563 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 RFNGQ9Y644 331 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 BZW2Q9Y6E2 419 aaKnown RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 CENPBD1B2RD01 187 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 PSPHP1O15172 72 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 GATCO43716 136 aaKnown RBP1.85□□□□□ -2.11
HDAC6-212ENST00000461608 NMT2O60551 498 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 GLSO94925 669 aaPredicted RBP1.85□□□□□ -2.11
HDAC6-212ENST00000461608 PLEKHA8P1O95397 391 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 MT-ND4P03905 459 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 S100A9P06702 114 aaKnown RBP1.85□□□□□ -2.11
HDAC6-212ENST00000461608 RHOXF2BP0C7M4 288 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 HSPD1P10809 573 aaKnown RBP1.85□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF32P17041 273 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 CFHR2P36980 270 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 MYCNOSP40205 109 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 OPRK1P41145 380 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 OR1G1P47890 313 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 ATP6V0D1P61421 351 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 RPL18AQ02543 176 aaKnown RBP1.85□□□□□ -2.11
HDAC6-212ENST00000461608 SIGLEC14Q08ET2 396 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 ST3GAL4Q11206 333 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 EIF4EBP1Q13541 118 aaPredicted RBP1.85□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF266Q14584 549 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 RBMY1FQ15415 496 aaKnown RBP1.85□□□□□ -2.11
HDAC6-212ENST00000461608 OR1Q1Q15612 314 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 TSC22D1Q15714 1073 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 VAMP3Q15836 100 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 ABCA11PQ4W5N1 156 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 GUSBP11Q6P575 273 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 TMEM205Q6UW68 189 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 CD300LGQ6UXG3 332 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 ERO1BQ86YB8 467 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 RAB43Q86YS6 212 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 SLC30A8Q8IWU4 369 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 DAW1Q8N136 415 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 LGI3Q8N145 548 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 KIF2BQ8N4N8 673 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 ARRDC1Q8N5I2 433 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 OR1S1Q8NH92 325 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 RXFP4Q8TDU9 374 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 L3HYPDHQ96EM0 354 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 SMARCD1Q96GM5 515 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 DOK1Q99704 481 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 KCNS3Q9BQ31 491 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 SFXN3Q9BWM7 321 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 TM6SF2Q9BZW4 377 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 GAL3ST2Q9H3Q3 398 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 KIR3DX1Q9H7L2 352 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 C6orf50Q9HD87 102 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 ZDHHC4Q9NPG8 344 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 PRSS16Q9NQE7 514 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 SIRT7Q9NRC8 400 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 RHBDL2Q9NX52 303 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 FLVCR2Q9UPI3 526 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 SBNO1A3KN83 1393 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 JCADQ9P266 1359 aa1.85□□□□□ -2.11
HDAC6-212ENST00000461608 A0A0B4J2E0 115 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 C7orf66A4D0T2 115 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 H0YJW9 148 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 H7C2Y5 167 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 DFFAO00273 331 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 MYL12BO14950 172 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 POLR1CO15160 346 aaPredicted RBP1.84□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF207O43670 478 aaKnown RBP1.84□□□□□ -2.11
HDAC6-212ENST00000461608 PLIN3O60664 434 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 SMC2O95347 1197 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 TGM6O95932 706 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 CCNE2O96020 404 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 CSTAP01040 98 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 ADRA2AP08913 450 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 MUC1P15941 1255 aaPredicted RBP1.84□□□□□ -2.11
HDAC6-212ENST00000461608 TUBG1P23258 451 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 ME2P23368 584 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 NPY1RP25929 384 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 PRSS3P35030 304 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 APLNRP35414 380 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 ARR3P36575 388 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 SERPINB8P50452 374 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 TAS2R31P59538 309 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 SLC35B1P78383 322 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 EIF4EBP2Q13542 120 aaPredicted RBP1.84□□□□□ -2.11
HDAC6-212ENST00000461608 PIGHQ14442 188 aaPredicted RBP1.84□□□□□ -2.11
HDAC6-212ENST00000461608 COX19Q49B96 90 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 YIF1BQ5BJH7 314 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 CPTPQ5TA50 214 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 MFSD14CQ5VZR4 134 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 MDP1Q86V88 176 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 TMEM256Q8N2U0 113 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 OR51L1Q8NGJ5 315 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 OR1L1Q8NH94 360 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF461Q8TAF7 563 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 LINC01560Q8TB33 94 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 ZFAND1Q8TCF1 268 aa1.84□□□□□ -2.11
HDAC6-212ENST00000461608 SFXN5Q8TD22 340 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms