RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SFTA3P0C7M3 94 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 CLEC12BQ2HXU8 276 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 SLC16A12Q6ZSM3 486 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 SLC25A26Q70HW3 274 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 CALHM3Q86XJ0 350 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 NPAS1Q99742 590 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 C20orf27Q9GZN8 174 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 XRN1Q8IZH2 1706 aaKnown RBP8.14□□□□□ -1.11
BRCA1-205ENST00000461221 ZC3H12DA2A288 527 aaKnown RBP8.14□□□□□ -1.11
BRCA1-205ENST00000461221 FAM221AA4D161 298 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 GPX5O75715 221 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 GYPAP02724 150 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 FGF2P09038 288 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 HTR1DP28221 377 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 CD200P41217 278 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 GPNMBQ14956 572 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 TTC9Q92623 222 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 DUS3LQ96G46 650 aaKnown RBP8.14□□□□□ -1.11
BRCA1-205ENST00000461221 IFT22Q9H7X7 185 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 ADGRL4Q9HBW9 690 aa8.14□□□□□ -1.11
BRCA1-205ENST00000461221 SLC22A20A6NK97 555 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 IDSB3KWA1 339 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 EVX1P49640 407 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 PRDX4Q13162 271 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 HLXQ14774 488 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-205ENST00000461221 XKR7Q5GH72 579 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 ZNF66Q6ZN08 573 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 ARRDC1Q8N5I2 433 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 OR4C16Q8NGL9 310 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 ROBO4Q8WZ75 1007 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 APOBEC3DQ96AK3 386 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-205ENST00000461221 MVB12AQ96EY5 273 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 SIGLEC11Q96RL6 698 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 SYT11Q9BT88 431 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 ADAT1Q9BUB4 502 aaKnown RBP8.13□□□□□ -1.11
BRCA1-205ENST00000461221 FKBP11Q9NYL4 201 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 BET1LQ9NYM9 111 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 HDGFL3Q9Y3E1 203 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 COL14A1Q05707 1796 aaKnown RBP8.13□□□□□ -1.11
BRCA1-205ENST00000461221 MS4A18H0YCH9 400 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 FABP4P15090 132 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 CRISP2P16562 243 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 GNG4P50150 75 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 PNLIPRP2P54317 469 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 MS4A18Q3C1V0 323 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 LBHQ53QV2 105 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM128Q5BJH2 165 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 OR52N4Q8NGI2 321 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 OR1L1Q8NH94 360 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 SLC37A2Q8TED4 501 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 PPP1R1CQ8WVI7 109 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 SHISA4Q96DD7 197 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 OR10C1Q96KK4 312 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 CYB5R1Q9UHQ9 305 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 A0A096LPE4 126 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 TRAV1-2A0A0B4J238 106 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 A0A1W2PNR3 127 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 A0A1W2PPZ6 126 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 NEURL1O76050 574 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 F11P03951 625 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 FAM87AP0C7U9 286 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 RD3LP0DJH9 198 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 NQO2P16083 231 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 FPR2P25090 351 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 OR2A2Q6IF42 318 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 KIAA1958Q8N8K9 716 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 KISS1RQ969F8 398 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-205ENST00000461221 CLDN23Q96B33 292 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 SEC11CQ9BY50 192 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 CRXO43186 299 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-205ENST00000461221 CXCL13O43927 109 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 ICOSLGO75144 302 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 TOMM34Q15785 309 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-205ENST00000461221 DGAT2L7PQ6IED9 249 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 RFLNAQ6ZTI6 216 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 SLC36A1Q7Z2H8 476 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 FBXL14Q8N1E6 418 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 ZNF680Q8NEM1 530 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 OR1L4Q8NGR5 311 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 SPNS1Q9H2V7 528 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 MMP26Q9NRE1 261 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 AP5S1Q9NUS5 200 aa8.13□□□□□ -1.11
BRCA1-205ENST00000461221 FRG2CA6NGY1 282 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 PI3P19957 117 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 ZP3P21754 424 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 FFAR4Q5NUL3 377 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 OR4A4PQ8NGN8 299 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 PP6455Q8WZ26 134 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 GPR137Q96N19 417 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 RNF2Q99496 336 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 OCEL1Q9H607 264 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 CLDN34H7C241 214 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 DHHO43323 396 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 PGA3P0DJD8 388 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 UBE2MP61081 183 aaKnown RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 GUK1Q16774 197 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 AFMIDQ63HM1 303 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms