RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 A0A1B0GWJ7 208 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 EFCAB10A6NFE3 127 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 TRIM64A6NGJ6 449 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 TRIM64BA6NI03 449 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 E9PI62 339 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 P2RY10O00398 339 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-229ENST00000460826 CD55P08174 381 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 CA6P23280 308 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 COL8A2P25067 703 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 RBMXP38159 391 aaKnown RBP11.88□□□□□ -0.51
HDLBP-229ENST00000460826 NANOS3P60323 173 aaKnown RBP11.88□□□□□ -0.51
HDLBP-229ENST00000460826 ACTA2P62736 377 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 ACTG2P63267 376 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 OR8B8Q15620 311 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 SNCBQ16143 134 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 CARTPTQ16568 116 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 ODF4Q2M2E3 257 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 PCGF3Q3KNV8 242 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 ZMAT1Q5H9K5 638 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 WDR38Q5JTN6 314 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 SPNS3Q6ZMD2 512 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 KCTD20Q7Z5Y7 419 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 TGIF2LYQ8IUE0 185 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 SYS1Q8N2H4 156 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 OR13G1Q8NGZ3 307 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 UBASH3BQ8TF42 649 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 TMEM80Q96HE8 168 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 TMEM100Q9NV29 134 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 PAK1IP1Q9NWT1 392 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-229ENST00000460826 CNOT2Q9NZN8 540 aaKnown RBP11.88□□□□□ -0.51
HDLBP-229ENST00000460826 ZDHHC8Q9ULC8 765 aa11.88□□□□□ -0.51
HDLBP-229ENST00000460826 IGHV4-30-2A0A087WSY4 118 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 IGHV3-64DA0A0J9YX35 117 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 IRGMA1A4Y4 181 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 F5H5P2 479 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 H3BSH0 61 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 TPD52L2O43399 206 aaKnown RBP11.87□□□□□ -0.51
HDLBP-229ENST00000460826 CDC14BO60729 498 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 TACSTD2P09758 323 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 CFL1P23528 166 aaKnown RBP11.87□□□□□ -0.51
HDLBP-229ENST00000460826 C21orf33P30042 268 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-229ENST00000460826 TNFAIP6P98066 277 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-229ENST00000460826 FAM209AQ5JX71 171 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 OR2G6Q5TZ20 316 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 FDX2Q6P4F2 183 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 COMMD2Q86X83 199 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 ZNF540Q8NDQ6 660 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 OR2G2Q8NGZ5 317 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 ITLN1Q8WWA0 313 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 FAM71F1Q96KD3 344 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-229ENST00000460826 DIRC2Q96SL1 478 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 SAP30LQ9HAJ7 183 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 MRPL15Q9P015 296 aaKnown RBP11.87□□□□□ -0.51
HDLBP-229ENST00000460826 ZNF391Q9UJN7 358 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 EXOSC1Q9Y3B2 195 aaKnown RBP11.87□□□□□ -0.51
HDLBP-229ENST00000460826 RHBDD3Q9Y3P4 386 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 CACNG2Q9Y698 323 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 ABCA2Q9BZC7 2435 aa11.87□□□□□ -0.51
HDLBP-229ENST00000460826 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 RP2O75695 350 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 HTR1AP08908 422 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 DDOSTP39656 456 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 PDLIM4P50479 330 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 DOC2BQ14184 412 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 XAF1Q6GPH4 301 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 CLEC2AQ6UVW9 174 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 ZNF786Q8N393 782 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 STX19Q8N4C7 294 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 KLHL36Q8N4N3 616 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 PLPP7Q8NBV4 271 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 FAM168AQ92567 244 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 RDH5Q92781 318 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 MRPL48Q96GC5 212 aaKnown RBP11.86□□□□□ -0.51
HDLBP-229ENST00000460826 MEGF10Q96KG7 1140 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 OR2V2Q96R30 315 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 ADAT1Q9BUB4 502 aaKnown RBP11.86□□□□□ -0.51
HDLBP-229ENST00000460826 DECR2Q9NUI1 292 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 DCAF16Q9NXF7 216 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 UBAP1Q9NZ09 502 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 TREM2Q9NZC2 230 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 FRRS1LQ9P0K9 344 aa11.86□□□□□ -0.51
HDLBP-229ENST00000460826 CAB39Q9Y376 341 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-229ENST00000460826 IGHV1-69-2A0A0G2JMI3 117 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 ANKRD30BLA7E2S9 258 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 PTGES3LE9PB15 166 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 LMX1BO60663 402 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 LALBAP00709 142 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 FAHP16930 419 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 MYL12AP19105 171 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 CCL1P22362 96 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 TNFSF4P23510 183 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 CRYBB2P43320 205 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 GTF2A1P52655 376 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-229ENST00000460826 MAB21L1Q13394 359 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 ALKBH1Q13686 389 aaKnown RBP11.85□□□□□ -0.51
HDLBP-229ENST00000460826 OR8G1Q15617 311 aa11.85□□□□□ -0.51
HDLBP-229ENST00000460826 CIARTQ8N365 385 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms