RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 TBXA2RP21731 343 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 GTF2H1P32780 548 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 HPCAL1P37235 193 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 GPR4P46093 362 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 RAB9AP51151 201 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 CAV2P51636 162 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 TDGF1P3P51864 188 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 PLTPP55058 493 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 YWHAEP62258 255 aaKnown RBP2.37□□□□□ -2.03
CCDC93-204ENST00000460781 SELENOTP62341 195 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 UBE2IP63279 158 aaKnown RBP2.37□□□□□ -2.03
CCDC93-204ENST00000460781 CTAG1AP78358 180 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 CSNK1G2P78368 415 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 EWSR1Q01844 656 aaKnown RBP eCLIP2.37□□□□□ -2.03
CCDC93-204ENST00000460781 GNA12Q03113 381 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 TLE4Q04727 773 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 SLAQ13239 276 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 ZNF630Q2M218 657 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-204ENST00000460781 GGTA1PQ4G0N0 100 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 HSP90AA4PQ58FG1 418 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 BEX5Q5H9J7 111 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 C6orf226Q5I0X4 101 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 MLIPQ5VWP3 458 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 TTC23LQ6PF05 361 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 TMEM220Q6QAJ8 160 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 IGFL3Q6UXB1 125 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 Q6ZS92 163 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 NLRP9Q7RTR0 991 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 TGIF2LYQ8IUE0 185 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 SLC35F2Q8IXU6 374 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 DEFB106AQ8N104 65 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 LINC00301Q8NCQ3 95 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 ZNF740Q8NDX6 193 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 LRRC20Q8TCA0 184 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 PAQR8Q8TEZ7 354 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 RAB1CQ92928 201 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 ECHDC3Q96DC8 303 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 TM4SF19Q96DZ7 209 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 SEC22AQ96IW7 307 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 COPS8Q99627 209 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 C20orf24Q9BUV8 137 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 CHIAQ9BZP6 476 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 ING2Q9H160 280 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 RHBGQ9H310 441 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 ZDHHC11Q9H8X9 412 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 SH2D2AQ9NP31 389 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 LHX9Q9NQ69 397 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 DDIT4Q9NX09 232 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 QPCTLQ9NXS2 382 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 MTCH1Q9NZJ7 389 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 STX18Q9P2W9 335 aaKnown RBP2.37□□□□□ -2.03
CCDC93-204ENST00000460781 WARS2Q9UGM6 360 aaKnown RBP2.37□□□□□ -2.03
CCDC93-204ENST00000460781 CD300AQ9UGN4 299 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 NUFIP1Q9UHK0 495 aaKnown RBP2.37□□□□□ -2.03
CCDC93-204ENST00000460781 RIMS3Q9UJD0 308 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 PITPNC1Q9UKF7 332 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 ASF1AQ9Y294 204 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 SLC17A4Q9Y2C5 497 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 GSTK1Q9Y2Q3 226 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 MEMO1Q9Y316 297 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 HIVEP2P31629 2446 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 ANKRD12Q6UB98 2062 aa2.37□□□□□ -2.03
CCDC93-204ENST00000460781 CCDC88CQ9P219 2028 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 TRAV6A0A075B6T7 132 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 PPIAL4EA0A075B759 164 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 IGHV1OR15-1A0A075B7D0 117 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 IGHV2-70DA0A0C4DH43 119 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 A0A0J9YYE9 177 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 BTN3A3O00478 584 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 BCKDKO14874 412 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 EIF3HO15372 352 aaKnown RBP eCLIP2.36□□□□□ -2.03
CCDC93-204ENST00000460781 TOX3O15405 576 aaPredicted RBP2.36□□□□□ -2.03
CCDC93-204ENST00000460781 PRKYO43930 277 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 NIPSNAP2O75323 286 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 TRBC1P01850 177 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 HPNP05981 417 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 ERCC1P07992 297 aaPredicted RBP2.36□□□□□ -2.03
CCDC93-204ENST00000460781 PLEKP08567 350 aaPredicted RBP2.36□□□□□ -2.03
CCDC93-204ENST00000460781 DUX4L4P0CJ87 422 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 PPIAL4FP0DN26 164 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 COX6B1P14854 86 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 ETS2P15036 469 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 IGLL1P15814 213 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 GSTM3P21266 225 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 TEAD1P28347 426 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 HTR1EP28566 365 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 HTR1FP30939 366 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 OR1E1P30953 314 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 LCN1P31025 176 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 RORAP35398 523 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 RBMXP38159 391 aaKnown RBP2.36□□□□□ -2.03
CCDC93-204ENST00000460781 ACTR1BP42025 376 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 CAPZBP47756 277 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 PRKXP51817 358 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 PKNOX1P55347 436 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 PPP1CAP62136 330 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 GPR176Q14439 515 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 ZNF235Q14590 738 aa2.36□□□□□ -2.03
CCDC93-204ENST00000460781 GANABQ14697 944 aaKnown RBP2.36□□□□□ -2.03
CCDC93-204ENST00000460781 STK38Q15208 465 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms