RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 APH1AQ96BI3 265 aa2.52□□□□□ -2.01
VBP1-202ENST00000460509 MTG1Q9BT17 334 aaPredicted RBP2.52□□□□□ -2.01
VBP1-202ENST00000460509 LYRM4Q9HD34 91 aa2.52□□□□□ -2.01
VBP1-202ENST00000460509 ZC4H2Q9NQZ6 224 aa2.52□□□□□ -2.01
VBP1-202ENST00000460509 PSME2Q9UL46 239 aa2.52□□□□□ -2.01
VBP1-202ENST00000460509 FARSAQ9Y285 508 aaKnown RBP2.52□□□□□ -2.01
VBP1-202ENST00000460509 COMMD3-BMI1R4GMX3 469 aa2.52□□□□□ -2.01
VBP1-202ENST00000460509 MROH5Q6ZUA9 1318 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 IGKV1-27A0A075B6S5 117 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 GOLGA6L7A0A1B0GV03 622 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 TMEM120BA0PK00 339 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 SUPT3HB4E1H0 165 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 GOLGA8TH3BQL2 631 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 TAAR5O14804 337 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 RAD1O60671 282 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 TDP2O95551 362 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 MT-ND4P03905 459 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 RPN2P04844 631 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 FGF4P08620 206 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 CASQ1P31415 396 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 AP1S2P56377 157 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 IFITM3Q01628 133 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 IRF8Q02556 426 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 RAD51Q06609 339 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 FUT5Q11128 374 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 BEX5Q5H9J7 111 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 RWDD4Q6NW29 188 aaKnown RBP2.51□□□□□ -2.01
VBP1-202ENST00000460509 GUSBP11Q6P575 273 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 MARVELD1Q9BSK0 173 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 NUDT9Q9BW91 350 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 IQCGQ9H095 443 aaKnown RBP2.51□□□□□ -2.01
VBP1-202ENST00000460509 MRPS30Q9NP92 439 aaKnown RBP2.51□□□□□ -2.01
VBP1-202ENST00000460509 AHSPQ9NZD4 102 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 DDX19BQ9UMR2 479 aa2.51□□□□□ -2.01
VBP1-202ENST00000460509 EIF4G1Q04637 1599 aaKnown RBP2.51□□□□□ -2.01
VBP1-202ENST00000460509 PLEKHG2Q9H7P9 1386 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
VBP1-202ENST00000460509 A0A1W2PRD5 423 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 CASC3O15234 703 aaKnown RBP2.5□□□□□ -2.01
VBP1-202ENST00000460509 SLC16A7O60669 478 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 GATBO75879 557 aaKnown RBP2.5□□□□□ -2.01
VBP1-202ENST00000460509 RNASE2P10153 161 aaKnown RBP2.5□□□□□ -2.01
VBP1-202ENST00000460509 PSMB5P28074 263 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 MYCNOSP40205 109 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 GPR1P46091 355 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 UBE2E1P51965 193 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 ZNF33AQ06730 810 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 NAB1Q13506 487 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 SLC25A35Q3KQZ1 300 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 CD300LGQ6UXG3 332 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 TMPRSS11AQ6ZMR5 421 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 Q6ZSR6 202 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 CALHM3Q86XJ0 350 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 ERO1BQ86YB8 467 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 COMMD1Q8N668 190 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 OR10W1Q8NGF6 305 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 PEX13Q92968 403 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 CPNE4Q96A23 557 aaPredicted RBP2.5□□□□□ -2.01
VBP1-202ENST00000460509 GPR21Q99679 349 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 KCNS3Q9BQ31 491 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 TOLLIPQ9H0E2 274 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 CLSTN2Q9H4D0 955 aa2.5□□□□□ -2.01
VBP1-202ENST00000460509 CHTOPQ9Y3Y2 248 aaKnown RBP2.5□□□□□ -2.01
VBP1-202ENST00000460509 ANKRD12Q6UB98 2062 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 TNIKQ9UKE5 1360 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 SCN1AP35498 2009 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 TRAV25A0A0B4J276 109 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 NCF1BA6NI72 391 aaPredicted RBP2.49□□□□□ -2.01
VBP1-202ENST00000460509 ZNF98A6NK75 572 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 CEACAM18A8MTB9 384 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 NCF1CA8MVU1 366 aaPredicted RBP2.49□□□□□ -2.01
VBP1-202ENST00000460509 XRCC2O43543 280 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 SLC39A6Q13433 755 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 KLHL12Q53G59 568 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 WDR82Q6UXN9 313 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 ZNF101Q8IZC7 436 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 C8orf31Q8N9H6 132 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 ST20-AS1Q8NBB2 130 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 INO80EQ8NBZ0 244 aaPredicted RBP2.49□□□□□ -2.01
VBP1-202ENST00000460509 DCAKDQ8WVC6 231 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 ASZ1Q8WWH4 475 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 TMEM159Q96B96 161 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 WDR34Q96EX3 536 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 KCNS1Q96KK3 526 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 C9orf72Q96LT7 481 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 GPR82Q96P67 336 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 OPALINQ96PE5 141 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 SCGB3A2Q96PL1 93 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 OR4K3Q96R72 315 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 RHOXF2Q9BQY4 288 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 CHCHD7Q9BUK0 85 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 LRRC42Q9Y546 428 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 TMEM94Q12767 1356 aa2.49□□□□□ -2.01
VBP1-202ENST00000460509 PHLPP2Q6ZVD8 1323 aa2.48□□□□□ -2.01
VBP1-202ENST00000460509 TSPOAP1O95153 1857 aa2.48□□□□□ -2.01
VBP1-202ENST00000460509 IGHV1-3A0A0C4DH29 117 aa2.48□□□□□ -2.01
VBP1-202ENST00000460509 A0A1B0GUH1 482 aa2.48□□□□□ -2.01
VBP1-202ENST00000460509 M0R1X1 148 aa2.48□□□□□ -2.01
VBP1-202ENST00000460509 MANBAO00462 879 aa2.48□□□□□ -2.01
VBP1-202ENST00000460509 MPDU1O75352 247 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms