RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 LGALS4P56470 323 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 SF3A3Q12874 501 aaKnown RBP eCLIP6.45□□□□□ -1.382e-8■■■■□ 21.9
HPS4-207ENST00000459918 PCK2Q16822 640 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 SNAI3Q3KNW1 292 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 SLC36A3Q495N2 470 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 PLA1AQ53H76 456 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 FGD3Q5JSP0 725 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 NANOGP8Q6NSW7 305 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 TBPL2Q6SJ96 375 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 CCBE1Q6UXH8 406 aaPredicted RBP6.45□□□□□ -1.38
HPS4-207ENST00000459918 MBOAT2Q6ZWT7 520 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 FKBP9P1Q75LS8 142 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 DPY19L4Q7Z388 723 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 NAA40Q86UY6 237 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 NDUFA11Q86Y39 141 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 RNF113BQ8IZP6 322 aaKnown RBP6.45□□□□□ -1.38
HPS4-207ENST00000459918 OR5T2Q8NGG2 359 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 DPF1Q92782 380 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 ZNF799Q96GE5 643 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 TSSK2Q96PF2 358 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 CITED2Q99967 270 aaPredicted RBP6.45□□□□□ -1.38
HPS4-207ENST00000459918 OCSTAMPQ9BR26 566 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 METTL8Q9H825 291 aaKnown RBP6.45□□□□□ -1.38
HPS4-207ENST00000459918 ZFAND3Q9H8U3 227 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 SRA1Q9HD15 236 aaKnown RBP6.45□□□□□ -1.38
HPS4-207ENST00000459918 SNTG1Q9NSN8 517 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 MRPL15Q9P015 296 aaKnown RBP6.45□□□□□ -1.38
HPS4-207ENST00000459918 KAAG1Q9UBP8 84 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 PRPF19Q9UMS4 504 aaKnown RBP6.45□□□□□ -1.38
HPS4-207ENST00000459918 A4GNTQ9UNA3 340 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 SF3B6Q9Y3B4 125 aaKnown RBP6.45□□□□□ -1.38
HPS4-207ENST00000459918 IER3IP1Q9Y5U9 82 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 CAPN7Q9Y6W3 813 aa6.45□□□□□ -1.38
HPS4-207ENST00000459918 A0A0G2JND7 137 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 A0A1B0GWJ7 208 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 E9PQ18 207 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 ACOT8O14734 319 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 GSTA4O15217 222 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 EDF1O60869 148 aaKnown RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 GLCEO94923 617 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 PPP1R3DO95685 299 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 CLIC3O95833 236 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 KDELR2P33947 212 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 GZMMP51124 257 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 BMXP51813 675 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 CAPZA1P52907 286 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 SELENOWP63302 87 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 SLC35A2P78381 396 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 ELF3P78545 371 aaPredicted RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 ZNF92Q03936 586 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 HABP2Q14520 560 aaPredicted RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 KCNMB1Q16558 191 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 RFX4Q33E94 735 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 GFOD2Q3B7J2 385 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 KHDC1LQ5JSQ8 128 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 GLYATL3Q5SZD4 288 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 TEX36Q5VZQ5 186 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 COLCA1Q6ZS62 124 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 PTCHD4Q6ZW05 846 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 KCTD8Q6ZWB6 473 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 TMPRSS11FQ6ZWK6 438 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 FAM122BQ7Z309 247 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 TSEN54Q7Z6J9 526 aaKnown RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 FAM185AQ8N0U4 392 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 OR6V1Q8N148 313 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 OR2T12Q8NG77 320 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 OR8J3Q8NGG0 315 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 OR56B2PQ8NGI1 322 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 OR4C15Q8NGM1 316 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 OR9Q1Q8NGQ5 310 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 FANK1Q8TC84 345 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 RSRC1Q96IZ7 334 aaKnown RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 ERMAPQ96PL5 475 aaPredicted RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 COPS4Q9BT78 406 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 RPRD1BQ9NQG5 326 aaKnown RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 ABCB10Q9NRK6 738 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 VSX1Q9NZR4 365 aaPredicted RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 SLC25A10Q9UBX3 287 aaPredicted RBP6.44□□□□□ -1.38
HPS4-207ENST00000459918 ZNF391Q9UJN7 358 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 RYR3Q15413 4870 aa6.44□□□□□ -1.38
HPS4-207ENST00000459918 A0A087WUU8 490 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 TRBV23-1A0A0A0MS06 115 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 HMGB1P1B2RPK0 211 aaPredicted RBP6.43□□□□□ -1.38
HPS4-207ENST00000459918 K7EIL1 84 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 M0R1W7 72 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 MRASO14807 208 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 FCN3O75636 299 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 SASH3O75995 380 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 SLC2A1P11166 492 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 SELLP14151 372 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 FAHP16930 419 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 COX7A1P24310 79 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 PAX6P26367 422 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 MSX2P35548 267 aaPredicted RBP6.43□□□□□ -1.38
HPS4-207ENST00000459918 CDKN2AP42771 156 aaKnown RBP6.43□□□□□ -1.38
HPS4-207ENST00000459918 GABRA2P47869 451 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 CSNK2BP67870 215 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 HIST1H3AP68431 136 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 FHL1Q13642 323 aa6.43□□□□□ -1.38
HPS4-207ENST00000459918 TIGD6Q17RP2 521 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms