RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 IQCF1Q8N6M8 205 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 INTS14Q96SY0 518 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 PCGF1Q9BSM1 259 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 SP140LQ9H930 580 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 MED20Q9H944 212 aa13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
CHCHD3-204ENST00000457942 MDFIC2A0A1B0GVS7 189 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 OOEPA6NGQ2 149 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 FAM183AA6NL82 134 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 C22orf46C9J442 243 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 GNGT2O14610 69 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 RAP2AP10114 183 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 PAICSP22234 425 aaKnown RBP13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 POU1F1P28069 291 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 SLC9A3R2Q15599 337 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 CD276Q5ZPR3 534 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 BRD3OSQ6XYD6 125 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 ZNF826PQ6ZT77 177 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 FAM57BQ71RH2 274 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 DPY19L4Q7Z388 723 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 PLPP7Q8NBV4 271 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 GIPC3Q8TF64 312 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 REEP6Q96HR9 211 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 C1orf147Q96MC9 270 aaPredicted RBP13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 NMNAT2Q9BZQ4 307 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 TOR3AQ9H497 397 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 MARCH7Q9H992 704 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 BRD7Q9NPI1 651 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 CMC2Q9NRP2 79 aa13.1□□□□□ -0.31
CHCHD3-204ENST00000457942 PLATP00750 562 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 CST1P01037 141 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 APOC1P02654 83 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 GYPAP02724 150 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 MDKP21741 143 aaPredicted RBP13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 OMGP23515 440 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 GSTT1P30711 240 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 GRK5P34947 590 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 GNALP38405 381 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 DDOSTP39656 456 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 PSMB10P40306 273 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 SRSF4Q08170 494 aaKnown RBP13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 PCK2Q16822 640 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 DNAL1Q4LDG9 190 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 TEX30Q5JUR7 227 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 ZNF841Q6ZN19 808 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 C9orf139Q6ZV77 190 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 SLC16A9Q7RTY1 509 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 ASB9Q96DX5 294 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 PGAM5Q96HS1 289 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 C1orf21Q9H246 121 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 OR51V1Q9H2C8 321 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 TNFRSF19Q9NS68 423 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 CTSZQ9UBR2 303 aa13.09□□□□□ -0.31
CHCHD3-204ENST00000457942 IGHV3OR15-7A0A075B7D8 119 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 NDUFA2O43678 99 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 E2F6O75461 281 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 H2BFMP0C1H6 154 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 ZNF121P58317 390 aaPredicted RBP13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 BNIP1Q12981 228 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 GK3PQ14409 553 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 METTL11BQ5VVY1 283 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 RUSC1-AS1Q66K80 236 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 SHFQ7M4L6 423 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 PNLDC1Q8NA58 520 aaKnown RBP13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 ST8SIA4Q92187 359 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 FEVQ99581 238 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 ABHD6Q9BV23 337 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 CHID1Q9BWS9 393 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 PAPOLGQ9BWT3 736 aaKnown RBP13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 OR10A2Q9H208 303 aa13.08□□□□□ -0.32
CHCHD3-204ENST00000457942 ZNF879B4DU55 563 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 CLDN34H7C241 214 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 HOXA3O43365 443 aaPredicted RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 DNAJC8O75937 253 aaPredicted RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 TOX4O94842 621 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 GLCEO94923 617 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 PTBP3O95758 552 aaKnown RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 SFTPBP07988 381 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 PRR23D2P0DMB1 279 aaPredicted RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 CFL1P23528 166 aaKnown RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 CFHR2P36980 270 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 RPS7P62081 194 aaKnown RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 IL13RA1P78552 427 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 FAM3AP98173 230 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 POU4F2Q12837 409 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 TUSC1Q2TAM9 212 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 DEFB112Q30KQ8 113 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 KLHL12Q53G59 568 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 LINC01590Q5TEZ4 76 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 HIST2H2BDQ6DRA6 164 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 FTMTQ8N4E7 242 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 GCSAMQ8N6F7 178 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 OR52H1Q8NGJ2 320 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 LRRC29Q8WV35 223 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 RNF133Q8WVZ7 376 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms