RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CCL13Q99616 98 aa11.76□□□□□ -0.53
UPF3AP2-201ENST00000457924 DNAJB11Q9UBS4 358 aa11.76□□□□□ -0.53
UPF3AP2-201ENST00000457924 AP3M1Q9Y2T2 418 aa11.76□□□□□ -0.53
UPF3AP2-201ENST00000457924 LOC100653049A0A140TA62 436 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 A0A1W2PRQ8 180 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 MEIOCA2RUB1 952 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 CXCR6O00574 342 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 BHLHE40O14503 412 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 GSTA4O15217 222 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 NDUFB3O43676 98 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 EDF1O60869 148 aaKnown RBP11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 KRT34O76011 436 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 H1F0P07305 194 aaKnown RBP11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 MUC1P15941 1255 aaPredicted RBP11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 PRB3Q04118 309 aaPredicted RBP11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 KLF10Q13118 480 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 DGCR6Q14129 220 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 FGD3Q5JSP0 725 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 C1orf122Q6ZSJ8 110 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 LNX2Q8N448 690 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 C11orf44Q8N8P7 122 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 OR8S1Q8NH09 359 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 LRRC29Q8WV35 223 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 NSRP1Q9H0G5 558 aaKnown RBP11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 RNPEPL1Q9HAU8 725 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 RPRD1BQ9NQG5 326 aaKnown RBP11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 SIGLEC9Q9Y336 463 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 FAM32AQ9Y421 112 aaKnown RBP11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 ENPP4Q9Y6X5 453 aa11.75□□□□□ -0.53
UPF3AP2-201ENST00000457924 A0A1B0GW55 424 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 SERPINA1P01009 418 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DUX4L2P0CJ85 424 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DUX4L3P0CJ86 424 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DUX4L4P0CJ87 422 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DUX4L5P0CJ88 424 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DUX4L6P0CJ89 424 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DUX4L7P0CJ90 424 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 ZNF823P16415 610 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 SAA4P35542 130 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 EFNB2P52799 333 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 IKZF1Q13422 519 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 PCK2Q16822 640 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 LRRC10Q5BKY1 277 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 WDR38Q5JTN6 314 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 GLYATL3Q5SZD4 288 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DUX4L9Q6RFH8 374 aaPredicted RBP11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 ZBTB46Q86UZ6 589 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 FAM216BQ8N7L0 139 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 OR4C13Q8NGP0 309 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 OR4K13Q8NH42 304 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 CFHR4Q92496 578 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 MAP6Q96JE9 813 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DCTN5Q9BTE1 182 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 DUX4Q9UBX2 424 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 KCNG2Q9UJ96 466 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 PRPF19Q9UMS4 504 aaKnown RBP11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 FOXJ3Q9UPW0 622 aa11.74□□□□□ -0.53
UPF3AP2-201ENST00000457924 ANKRD30BLA7E2S9 258 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 H3BUX3 64 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 ARPC3O15145 178 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 XPNPEP2O43895 674 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 HIST1H1CP16403 213 aaKnown RBP11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 SLC6A6P31641 620 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 KIR2DS4P43632 304 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 LIPEQ05469 1076 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 DBPQ10586 325 aaPredicted RBP11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 KLRD1Q13241 179 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 NCR3LG1Q68D85 454 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 DRAM2Q6UX65 266 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 ARPINQ7Z6K5 226 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 KLHDC1Q8N7A1 406 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 Q8N7P7 452 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 OR56B2PQ8NGI1 322 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 OR4C15Q8NGM1 316 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 OR2T6Q8NHC8 308 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 PPP1R35Q8TAP8 253 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 FANK1Q8TC84 345 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 C12orf43Q96C57 262 aaKnown RBP11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 IFT27Q9BW83 186 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 SSBP4Q9BWG4 385 aaPredicted RBP11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 FAM234AQ9H0X4 552 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 OPA3Q9H6K4 179 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 NECAP2Q9NVZ3 263 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 CMTM6Q9NX76 183 aa11.73□□□□□ -0.53
UPF3AP2-201ENST00000457924 NAA10P41227 235 aaPredicted RBP11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 UBE2E1P51965 193 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 DLX1P56177 255 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 ELF3P78545 371 aaPredicted RBP11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 ACSM1Q08AH1 577 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 PGBD2Q6P3X8 592 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 Q6ZS46 218 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 DPY19L4Q7Z388 723 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 C11orf53Q8IXP5 236 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 PNKDQ8N490 385 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 C8orf46Q8TAG6 207 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 H1FXQ92522 213 aaKnown RBP11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 SGCDQ92629 289 aa11.72□□□□□ -0.53
UPF3AP2-201ENST00000457924 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms