RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 BGLAPP02818 100 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 ISG15P05161 165 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 CDX1P47902 265 aaPredicted RBP9.15□□□□□ -0.94
CLIP4-208ENST00000456385 RPL27P61353 136 aaKnown RBP9.15□□□□□ -0.94
CLIP4-208ENST00000456385 RPS21P63220 83 aaKnown RBP9.15□□□□□ -0.94
CLIP4-208ENST00000456385 PCK2Q16822 640 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 IAH1Q2TAA2 248 aaPredicted RBP9.15□□□□□ -0.94
CLIP4-208ENST00000456385 PDZD11Q5EBL8 140 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 HEPN1Q6WQI6 88 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 GALNTL5Q7Z4T8 443 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 ZNF440Q8IYI8 595 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 PRR22Q8IZ63 422 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 MRPL43Q8N983 215 aaKnown RBP9.15□□□□□ -0.94
CLIP4-208ENST00000456385 OR1J1Q8NGS3 322 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 JSRP1Q96MG2 331 aaPredicted RBP9.15□□□□□ -0.94
CLIP4-208ENST00000456385 LPAR5Q9H1C0 372 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 S1PR5Q9H228 398 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 FAM60AQ9NP50 221 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 CENPMQ9NSP4 180 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 PUS1Q9Y606 427 aaKnown RBP eCLIP9.15□□□□□ -0.94
CLIP4-208ENST00000456385 ZNF727A8MUV8 499 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 MASP2O00187 686 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 OR2C1O95371 312 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 BPNT1O95861 308 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 CD63P08962 238 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 ACRP10323 421 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 BCKDHBP21953 392 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 TMEM50BP56557 158 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 FMODQ06828 376 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 GFI1BQ5VTD9 330 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 FIP1L1Q6UN15 594 aaKnown RBP9.15□□□□□ -0.95
CLIP4-208ENST00000456385 DBX2Q6ZNG2 339 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 SLC22A24Q8N4F4 322 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF321PQ8N8H1 164 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF519Q8TB69 540 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 ST7LQ8TDW4 575 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 MR1Q95460 341 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 ELSPBP1Q96BH3 223 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 SGK3Q96BR1 496 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 TOX2Q96NM4 488 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 YPEL4Q96NS1 127 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 DGAT2Q96PD7 388 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 TGM7Q96PF1 710 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 ST6GALNAC5Q9BVH7 336 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 CNTNAP3Q9BZ76 1288 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 UBQLN4Q9NRR5 601 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 GAR1Q9NY12 217 aaKnown RBP9.15□□□□□ -0.95
CLIP4-208ENST00000456385 DOK5Q9P104 306 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 CLDN16Q9Y5I7 305 aa9.15□□□□□ -0.95
CLIP4-208ENST00000456385 SPTBN5Q9NRC6 3674 aaKnown RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 CEACAM18A8MTB9 384 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 SCDO00767 359 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 MPIG6BO95866 241 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 IFI6P09912 130 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 HLA-DOBP13765 273 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 CXCR1P25024 350 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 FPR2P25090 351 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 S100A2P29034 98 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 FAM3AP98173 230 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 GLO1Q04760 184 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 RHEBQ15382 184 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 VAX1Q5SQQ9 334 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF343Q6P1L6 599 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 SSX9Q7RTT3 188 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 PEG10Q86TG7 708 aaKnown RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 WDFY1Q8IWB7 410 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 METTL27Q8N6F8 245 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 OR10D4PQ8NGN7 298 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 SH3BGRL3Q9H299 93 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 FAM212BQ9NTI7 297 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 UFSP2Q9NUQ7 469 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 HDGFL3Q9Y3E1 203 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 LSM5Q9Y4Y9 91 aaKnown RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 ARHGEF17Q96PE2 2063 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 TMEM14DPA8MWL7 114 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 RAMP1O60894 148 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 UTS2O95399 124 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 SCGB1D2O95969 90 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 DANCRP0C864 163 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 NDUFB7P17568 137 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 HSD11B1P28845 292 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 RAP1AP62834 184 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF117Q03924 483 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 GLIPR1L1Q6UWM5 242 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 SPNS3Q6ZMD2 512 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 MAMDC2Q7Z304 686 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 C1QL4Q86Z23 238 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 CCDC54Q8NEL0 328 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 OR5H2Q8NGV7 314 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 RSC1A1Q92681 617 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 S100PBPQ96BU1 408 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 ARHGAP5-AS1Q96IT6 56 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 CCNL2Q96S94 520 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-208ENST00000456385 ADOQ96SZ5 270 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 RARRES2Q99969 163 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 ADAM19Q9H013 955 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
CLIP4-208ENST00000456385 OPA3Q9H6K4 179 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms