RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SLC7A10Q9NS82 523 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 EMC3Q9P0I2 261 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 ARID1AO14497 2285 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 CIB4A0PJX0 185 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 LPLP06858 475 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 TMEM225BP0DP42 221 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 NOVA1P51513 510 aaKnown RBP11.98□□□□□ -0.49
CLK3-203ENST00000454830 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
CLK3-203ENST00000454830 C1orf100Q5SVJ3 147 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 GABRG1Q8N1C3 465 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 SCMH1Q96GD3 660 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 TINAGL1Q9GZM7 467 aaPredicted RBP11.98□□□□□ -0.49
CLK3-203ENST00000454830 GPN1Q9HCN4 374 aaPredicted RBP11.98□□□□□ -0.49
CLK3-203ENST00000454830 SLC17A5Q9NRA2 495 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 TIMM10BQ9Y5J6 103 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 CSAG2Q9Y5P2 127 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 ACACAQ13085 2346 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 CCL2P13500 99 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 LHX2P50458 406 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 UBE2MP61081 183 aaKnown RBP11.97□□□□□ -0.49
CLK3-203ENST00000454830 RAB35Q15286 201 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 RHOUQ7L0Q8 258 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 FJX1Q86VR8 437 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 TMEM104Q8NE00 496 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 OR51T1Q8NGJ9 327 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 OR52B4Q8NGK2 314 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 SEH1LQ96EE3 360 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 REEP6Q96HR9 211 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 OR51B6Q9H340 312 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 GHITMQ9H3K2 345 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 LIPGQ9Y5X9 500 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 PCSK5Q92824 1860 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 UBE2QL1A1L167 161 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 PYCARD-AS1I3L0S3 204 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 CYTIPO60759 359 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 DHRS3O75911 302 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 RAB12Q6IQ22 244 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 P4HA3Q7Z4N8 544 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 SKA3Q8IX90 412 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 GVQW1Q8N7I0 195 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 OR11H7Q8NGC8 314 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 MS4A3Q96HJ5 214 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 PARPBPQ9NWS1 579 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 MGAT4CQ9UBM8 478 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 BPNT1O95861 308 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 HLA-HP01893 362 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 CSRP1P21291 193 aaKnown RBP11.97□□□□□ -0.49
CLK3-203ENST00000454830 TAS2R19P59542 299 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 PSG4Q00888 419 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 UNC119Q13432 240 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 ABLIM2Q6H8Q1 611 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 OR52W1Q6IF63 320 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 OR14K1Q8NGZ2 314 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 FGFBP3Q8TAT2 258 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 APH1AQ96BI3 265 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 LYZL4Q96KX0 146 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 UQCC2Q9BRT2 126 aa11.97□□□□□ -0.49
CLK3-203ENST00000454830 ZNF587BE7ETH6 402 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 LINC01387J3KSC0 135 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 TERTO14746 1132 aaKnown RBP11.96□□□□□ -0.49
CLK3-203ENST00000454830 IFNA6P05013 189 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 GABRA1P14867 456 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 CAPZA1P52907 286 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 CLDN18P56856 261 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 RBMS2Q15434 407 aaKnown RBP11.96□□□□□ -0.49
CLK3-203ENST00000454830 KISS1Q15726 138 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 DEFB109BQ30KR1 87 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 PABPC1L2AQ5JQF8 200 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 METTL11BQ5VVY1 283 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 IDO2Q6ZQW0 420 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 OR5AS1Q8N127 324 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 TMEM178AQ8NBL3 297 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 TTLL8A6PVC2 850 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 CREBL2O60519 120 aaPredicted RBP11.96□□□□□ -0.49
CLK3-203ENST00000454830 ERP29P30040 261 aaKnown RBP11.96□□□□□ -0.49
CLK3-203ENST00000454830 MTCP1P56278 107 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 PCBD1P61457 104 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 RNASE10Q5GAN6 216 aaKnown RBP11.96□□□□□ -0.49
CLK3-203ENST00000454830 NKAPLQ5M9Q1 402 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 BPIFB2Q8N4F0 458 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 SEMA6DQ8NFY4 1073 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 KCNG3Q8TAE7 436 aa11.96□□□□□ -0.49
CLK3-203ENST00000454830 HPNP05981 417 aa11.96□□□□□ -0.5
CLK3-203ENST00000454830 BATF2Q8N1L9 274 aa11.96□□□□□ -0.5
CLK3-203ENST00000454830 OR52H1Q8NGJ2 320 aa11.96□□□□□ -0.5
CLK3-203ENST00000454830 URM1Q9BTM9 101 aaKnown RBP11.96□□□□□ -0.5
CLK3-203ENST00000454830 TRGV5A0A0B4J1U4 118 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 CST2P09228 141 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 PIP4P1Q86T03 277 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 RTN4RL2Q86UN3 420 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 TCTE3Q8IZS6 198 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 OR2T35Q8NGX2 323 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 GRPEL2Q8TAA5 225 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 GPX8Q8TED1 209 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 ZNF431Q8TF32 576 aaPredicted RBP11.95□□□□□ -0.5
CLK3-203ENST00000454830 PIGCQ92535 297 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 SGK3Q96BR1 496 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 RAB3CQ96E17 227 aa11.95□□□□□ -0.5
CLK3-203ENST00000454830 CST11Q9H112 138 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms