RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SULT1C4O75897 302 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 PNPP00491 289 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 KRT8P05787 483 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 CHN2P52757 468 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 SLC3A1Q07837 685 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 OR8B8Q15620 311 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 ZNF691Q5VV52 312 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 CELF2-AS1Q8N7Q2 184 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 APH1BQ8WW43 257 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 CYGBQ8WWM9 190 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 LGALS12Q96DT0 336 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 PBOV1Q9GZY1 135 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 GCM1Q9NP62 436 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 NUFIP1Q9UHK0 495 aaKnown RBP16.85■□□□□ 0.29
COL9A3-202ENST00000452372 PPP1R3CQ9UQK1 317 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 PCDHGB1Q9Y5G3 927 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 R4GMQ9 66 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.85■□□□□ 0.297e-12■■■■□ 22.1
COL9A3-202ENST00000452372 LRP5LA4QPB2 252 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 METTL15A6NJ78 407 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 A8MV72 311 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-202ENST00000452372 CD200P41217 278 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 ACTC1P68032 377 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 ACTA1P68133 377 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 ZNF85Q03923 595 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 ZNF91Q05481 1191 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 MAB21L1Q13394 359 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 OR8G1Q15617 311 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 C6orf52Q5T4I8 152 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 PLEKHG7Q6ZR37 379 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 KLBQ86Z14 1044 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 YIPF7Q8N8F6 280 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 SPERTQ8NA61 448 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 CSNK2A3Q8NEV1 391 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 HPS1Q92902 700 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 RAB1CQ92928 201 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 ITFG2Q969R8 447 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 LYZL4Q96KX0 146 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 SIGLEC11Q96RL6 698 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 MOB1AQ9H8S9 216 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 RNPEPL1Q9HAU8 725 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 G6PC2Q9NQR9 355 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 TMEM106BQ9NUM4 274 aa16.84■□□□□ 0.29
COL9A3-202ENST00000452372 ANKRD30BLA7E2S9 258 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 LOC110117498-PIK3R3F6TDL0 507 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 WBP4O75554 376 aaKnown RBP16.83■□□□□ 0.28
COL9A3-202ENST00000452372 CLIC3O95833 236 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 IGHV4-31P0DP07 118 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 DBTP11182 482 aaKnown RBP16.83■□□□□ 0.28
COL9A3-202ENST00000452372 GATA4P43694 442 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 IL5RAQ01344 420 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 MFGE8Q08431 387 aaPredicted RBP16.83■□□□□ 0.28
COL9A3-202ENST00000452372 SNCBQ16143 134 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 LIPNQ5VXI9 398 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 ACBD7Q8N6N7 88 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 PPP1R14AQ96A00 147 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 TIMD4Q96H15 378 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 ADAT1Q9BUB4 502 aaKnown RBP16.83■□□□□ 0.28
COL9A3-202ENST00000452372 ADI1Q9BV57 179 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 VCXQ9H320 206 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 AMBNQ9NP70 447 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 MRPS18AQ9NVS2 196 aaKnown RBP16.83■□□□□ 0.28
COL9A3-202ENST00000452372 RPL36Q9Y3U8 105 aaKnown RBP16.83■□□□□ 0.28
COL9A3-202ENST00000452372 WIPI2Q9Y4P8 454 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 SNX5Q9Y5X3 404 aa16.83■□□□□ 0.28
COL9A3-202ENST00000452372 H0YAE9 185 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 IFNL4K9M1U5 179 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 IGLV3-1P01715 115 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 GZMKP49863 264 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 ISL1P61371 349 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 MVKQ03426 396 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 IL18R1Q13478 541 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 AVPI1Q5T686 147 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 CYB5R2Q6BCY4 276 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 PEG10Q86TG7 708 aaKnown RBP16.82■□□□□ 0.28
COL9A3-202ENST00000452372 ELMOD2Q8IZ81 293 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 FTMTQ8N4E7 242 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 SETD9Q8NE22 299 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 CLDND2Q8NHS1 167 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 ERGIC1Q969X5 290 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 SOX7Q9BT81 388 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 DCAF16Q9NXF7 216 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 OR52A1Q9UKL2 312 aa16.82■□□□□ 0.28
COL9A3-202ENST00000452372 DAPL1A0PJW8 107 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 H0YHG0 523 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 WNT9BO14905 357 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 RPP14O95059 124 aaKnown RBP16.81■□□□□ 0.28
COL9A3-202ENST00000452372 PTBP3O95758 552 aaKnown RBP16.81■□□□□ 0.28
COL9A3-202ENST00000452372 FADS2O95864 444 aaKnown RBP16.81■□□□□ 0.28
COL9A3-202ENST00000452372 TTRP02766 147 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 ACKR3P25106 362 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 CAPGP40121 348 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 RAB40BQ12829 278 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 ZNF181Q2M3W8 571 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 CDONQ4KMG0 1287 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 KLHL22Q53GT1 634 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 BCL2L15Q5TBC7 163 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 KCTD20Q7Z5Y7 419 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 PLPP7Q8NBV4 271 aa16.81■□□□□ 0.28
COL9A3-202ENST00000452372 OR51E1Q8TCB6 317 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms