RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RPS27LQ71UM5 84 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 CHST14Q8NCH0 376 aa2□□□□□ -2.09
USP53-202ENST00000450251 OR4F5Q8NH21 305 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMEM170AQ8WVE7 144 aa2□□□□□ -2.09
USP53-202ENST00000450251 HMGB4Q8WW32 186 aa2□□□□□ -2.09
USP53-202ENST00000450251 MBD3L1Q8WWY6 194 aa2□□□□□ -2.09
USP53-202ENST00000450251 PSMG2Q969U7 264 aa2□□□□□ -2.09
USP53-202ENST00000450251 SEH1LQ96EE3 360 aa2□□□□□ -2.09
USP53-202ENST00000450251 ARSGQ96EG1 525 aa2□□□□□ -2.09
USP53-202ENST00000450251 DGAT2Q96PD7 388 aa2□□□□□ -2.09
USP53-202ENST00000450251 OR4F4Q96R69 305 aa2□□□□□ -2.09
USP53-202ENST00000450251 RAB40CQ96S21 281 aa2□□□□□ -2.09
USP53-202ENST00000450251 SDHCQ99643 169 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 LPAR4Q99677 370 aa2□□□□□ -2.09
USP53-202ENST00000450251 MESP1Q9BRJ9 268 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMEM208Q9BTX3 173 aa2□□□□□ -2.09
USP53-202ENST00000450251 MS4A8Q9BY19 250 aa2□□□□□ -2.09
USP53-202ENST00000450251 DEFB129Q9H1M3 183 aa2□□□□□ -2.09
USP53-202ENST00000450251 UBTD1Q9HAC8 227 aa2□□□□□ -2.09
USP53-202ENST00000450251 BCL2L10Q9HD36 194 aa2□□□□□ -2.09
USP53-202ENST00000450251 JKAMPQ9P055 326 aa2□□□□□ -2.09
USP53-202ENST00000450251 PIM2Q9P1W9 311 aa2□□□□□ -2.09
USP53-202ENST00000450251 FBXL17Q9UF56 701 aa2□□□□□ -2.09
USP53-202ENST00000450251 APOBEC3BQ9UH17 382 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 PRSS50Q9UI38 385 aa2□□□□□ -2.09
USP53-202ENST00000450251 ST3GAL6Q9Y274 331 aa2□□□□□ -2.09
USP53-202ENST00000450251 WASHC3Q9Y3C0 194 aa2□□□□□ -2.09
USP53-202ENST00000450251 HES2Q9Y543 173 aa2□□□□□ -2.09
USP53-202ENST00000450251 KCPQ6ZWJ8 1503 aa2□□□□□ -2.09
USP53-202ENST00000450251 DDX60LQ5H9U9 1706 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 A0A1B0GV50 99 aa2□□□□□ -2.09
USP53-202ENST00000450251 NKX6-3A6NJ46 265 aa2□□□□□ -2.09
USP53-202ENST00000450251 COLCA2A8K830 154 aa2□□□□□ -2.09
USP53-202ENST00000450251 PRSS47A8MTI9 375 aa2□□□□□ -2.09
USP53-202ENST00000450251 C1QTNF3-AMACRE9PGA6 284 aa2□□□□□ -2.09
USP53-202ENST00000450251 NPIPB8E9PQR5 432 aa2□□□□□ -2.09
USP53-202ENST00000450251 K7EQM0 130 aa2□□□□□ -2.09
USP53-202ENST00000450251 GEMIN2O14893 280 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 ARPC3O15145 178 aa2□□□□□ -2.09
USP53-202ENST00000450251 SLC25A17O43808 307 aa2□□□□□ -2.09
USP53-202ENST00000450251 CST3P01034 146 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 PGA4P0DJD7 388 aa2□□□□□ -2.09
USP53-202ENST00000450251 PGA5P0DJD9 388 aa2□□□□□ -2.09
USP53-202ENST00000450251 GP1BBP13224 206 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZBTB25P24278 435 aa2□□□□□ -2.09
USP53-202ENST00000450251 GALNSP34059 522 aa2□□□□□ -2.09
USP53-202ENST00000450251 G6PCP35575 357 aa2□□□□□ -2.09
USP53-202ENST00000450251 PRLHRP49683 370 aa2□□□□□ -2.09
USP53-202ENST00000450251 PNLIPRP2P54317 469 aa2□□□□□ -2.09
USP53-202ENST00000450251 CATR1Q13166 79 aa2□□□□□ -2.09
USP53-202ENST00000450251 MLC1Q15049 377 aa2□□□□□ -2.09
USP53-202ENST00000450251 LTC4SQ16873 150 aa2□□□□□ -2.09
USP53-202ENST00000450251 PRICKLE4Q2TBC4 344 aa2□□□□□ -2.09
USP53-202ENST00000450251 CTXN3Q4LDR2 81 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZNF506Q5JVG8 444 aa2□□□□□ -2.09
USP53-202ENST00000450251 CTSL3PQ5NE16 218 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMEM225Q6GV28 225 aa2□□□□□ -2.09
USP53-202ENST00000450251 FBXL22Q6P050 247 aa2□□□□□ -2.09
USP53-202ENST00000450251 CLEC2AQ6UVW9 174 aa2□□□□□ -2.09
USP53-202ENST00000450251 HEPN1Q6WQI6 88 aa2□□□□□ -2.09
USP53-202ENST00000450251 STAC2Q6ZMT1 411 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMEM136Q6ZRR5 245 aa2□□□□□ -2.09
USP53-202ENST00000450251 TAS1R1Q7RTX1 841 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMEM151BQ8IW70 566 aa2□□□□□ -2.09
USP53-202ENST00000450251 IL22RA1Q8N6P7 574 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZFP62Q8NB50 900 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 CYB561A3Q8NBI2 242 aa2□□□□□ -2.09
USP53-202ENST00000450251 OR4K14Q8NGD5 310 aa2□□□□□ -2.09
USP53-202ENST00000450251 OR52B6Q8NGF0 335 aa2□□□□□ -2.09
USP53-202ENST00000450251 SHISA4Q96DD7 197 aa2□□□□□ -2.09
USP53-202ENST00000450251 APIPQ96GX9 242 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZNF764Q96H86 408 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 AMDHD1Q96NU7 426 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZNF385AQ96PM9 386 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 SIGLEC11Q96RL6 698 aa2□□□□□ -2.09
USP53-202ENST00000450251 ALG12Q9BV10 488 aa2□□□□□ -2.09
USP53-202ENST00000450251 CFHR5Q9BXR6 569 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMEM59Q9BXS4 323 aa2□□□□□ -2.09
USP53-202ENST00000450251 PECRQ9BY49 303 aa2□□□□□ -2.09
USP53-202ENST00000450251 FKRPQ9H9S5 495 aa2□□□□□ -2.09
USP53-202ENST00000450251 CALHM2Q9HA72 323 aa2□□□□□ -2.09
USP53-202ENST00000450251 LANCL2Q9NS86 450 aa2□□□□□ -2.09
USP53-202ENST00000450251 CUTCQ9NTM9 273 aa2□□□□□ -2.09
USP53-202ENST00000450251 SLC2A8Q9NY64 477 aa2□□□□□ -2.09
USP53-202ENST00000450251 CYSLTR1Q9Y271 337 aa2□□□□□ -2.09
USP53-202ENST00000450251 CHST2Q9Y4C5 530 aa2□□□□□ -2.09
USP53-202ENST00000450251 SOX21Q9Y651 276 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 A0A087WUJ7 227 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SERTM2A0A1B0GWG4 89 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RNF222A6NCQ9 220 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MEIS3P2A8K0S8 358 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 A8MWP6 167 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ANKRD66B4E2M5 251 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 F8VVB4 439 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 F8VWA3 439 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 J3QR06 171 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 M0QYG6 137 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 M0R296 226 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TNFRSF10CO14798 259 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 NPIPB7O75200 414 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms