RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 ARID1AO14497 2285 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 ANKUB1A6NFN9 424 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 SFT2D2O95562 160 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 MUC1P15941 1255 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-209ENST00000448770 ID4P47928 161 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 RAB32Q13637 225 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 DHRS7BQ6IAN0 325 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-209ENST00000448770 TMPRSS9Q7Z410 1059 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 CCDC36Q8IYA8 594 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-209ENST00000448770 TMEM41AQ96HV5 264 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 FAM71F1Q96KD3 344 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-209ENST00000448770 CHRNA10Q9GZZ6 450 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 OR2S2Q9NQN1 319 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 UNC13CQ8NB66 2214 aa12.07□□□□□ -0.48
POLR1B-209ENST00000448770 IGHV1OR15-9A0A0B4J2B8 117 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 C9JQL5 133 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 MFNGO00587 321 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 RER1O15258 196 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 ZNF121P58317 390 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-209ENST00000448770 PNLIPRP3Q17RR3 467 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 ABHD12BQ7Z5M8 362 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-209ENST00000448770 GKN2Q86XP6 184 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 OR5D18Q8NGL1 313 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 OR5D14Q8NGL3 314 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 POC1BQ8TC44 478 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 RAB3CQ96E17 227 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-209ENST00000448770 PNRC2Q9NPJ4 139 aaKnown RBP12.06□□□□□ -0.48
POLR1B-209ENST00000448770 GPR84Q9NQS5 396 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 SRPK3Q9UPE1 567 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 RTTNQ86VV8 2226 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 ZNF98A6NK75 572 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 CEACAM18A8MTB9 384 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 METTL12A8MUP2 240 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 LYL1P12980 280 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 GLRA1P23415 457 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 CX3CR1P49238 355 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 P2RY4P51582 365 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 HSD11B2P80365 405 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 SPEM2Q0P670 501 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 AIMP2Q13155 320 aaKnown RBP12.06□□□□□ -0.48
POLR1B-209ENST00000448770 GFOD2Q3B7J2 385 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 VAX1Q5SQQ9 334 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 CARD17Q5XLA6 110 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 ZNF585AQ6P3V2 769 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 PEG10Q86TG7 708 aaKnown RBP12.06□□□□□ -0.48
POLR1B-209ENST00000448770 LHFPL1Q86WI0 220 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 OR10H5Q8NGA6 315 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 NUBPLQ8TB37 319 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 ARL11Q969Q4 196 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 MVB12AQ96EY5 273 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 C8orf33Q9H7E9 229 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-209ENST00000448770 SEC61A2Q9H9S3 476 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 UQCC1Q9NVA1 299 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 SDK1Q7Z5N4 2213 aa12.06□□□□□ -0.48
POLR1B-209ENST00000448770 ADAMTS20P59510 1910 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 IGKV1D-8A0A087WSZ0 117 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 C2CD4DB7Z1M9 353 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 MSTNO14793 375 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 TBPP20226 339 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 LAP3P28838 519 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 LPAR6P43657 344 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 CTAG1AP78358 180 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 NAAAQ02083 359 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 MYBPHQ13203 477 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 IL15RAQ13261 267 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 C14orf28Q4W4Y0 310 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 ETV3LQ6ZN32 361 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 NAA40Q86UY6 237 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 COMMD2Q86X83 199 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 POC1AQ8NBT0 407 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 SSC4DQ8WTU2 575 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 RNF141Q8WVD5 230 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 ZDHHC12Q96GR4 267 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
POLR1B-209ENST00000448770 SLC5A7Q9GZV3 580 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 HRH4Q9H3N8 390 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 TREM1Q9NP99 234 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 ASH2LQ9UBL3 628 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 OSGIN2Q9Y236 505 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 IGHV1OR21-1A0A087WYE8 117 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 A0A1W2PNR3 127 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 MEX3AA1L020 520 aaKnown RBP12.05□□□□□ -0.48
POLR1B-209ENST00000448770 NPIPB13A6NJU9 1138 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 ZNF705EA8MWA4 302 aaPredicted RBP12.05□□□□□ -0.48
POLR1B-209ENST00000448770 NPIPB4C9JG80 1138 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 H7C2Y5 167 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 PGA4P0DJD7 388 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 PGA3P0DJD8 388 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 ZNF20P17024 532 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
POLR1B-209ENST00000448770 SLC6A9P48067 706 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 AKR1D1P51857 326 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 STK11Q15831 433 aa12.05□□□□□ -0.48
POLR1B-209ENST00000448770 RPL7L1Q6DKI1 246 aaKnown RBP12.05□□□□□ -0.48
POLR1B-209ENST00000448770 PRSS54Q6PEW0 395 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms