RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 KCTD20Q7Z5Y7 419 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 PEG10Q86TG7 708 aaKnown RBP11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 CNIH3Q8TBE1 160 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 APH1BQ8WW43 257 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 MEGF10Q96KG7 1140 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 SIGLEC11Q96RL6 698 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 ADAT1Q9BUB4 502 aaKnown RBP11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 NUFIP1Q9UHK0 495 aaKnown RBP11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 OR52A1Q9UKL2 312 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 SNX5Q9Y5X3 404 aa11.89□□□□□ -0.51
GTF3C3-206ENST00000448539 A0A0U1RQV5 110 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 F5H5P2 479 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 H0YJX3 145 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 MLNRO43193 412 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 WBP4O75554 376 aaKnown RBP11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 RP2O75695 350 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 ATP6V1G2O95670 118 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 MAP2K3P46734 347 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 CHN2P52757 468 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 ACTA2P62736 377 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 ACTG2P63267 376 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 RIPK1Q13546 671 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 TP53I3Q53FA7 332 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 KLBQ86Z14 1044 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 SPERTQ8NA61 448 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 OR8S1Q8NH09 359 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 OR51E1Q8TCB6 317 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 NRG4Q8WWG1 115 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 RAB1CQ92928 201 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 ITFG2Q969R8 447 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 PAPOLGQ9BWT3 736 aaKnown RBP11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 INPP5EQ9NRR6 644 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 PPP1R3CQ9UQK1 317 aa11.88□□□□□ -0.51
GTF3C3-206ENST00000448539 NIPBLQ6KC79 2804 aaeCLIP11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 J3QRE1 110 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 IFNL4K9M1U5 179 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 PNPP00491 289 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 HEXAP06865 529 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 ATP6V1B1P15313 513 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 AQP4P55087 323 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 ISL1P61371 349 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 MED21Q13503 144 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 OR8B8Q15620 311 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 SMN1Q16637 294 aaKnown RBP11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 SPRNQ5BIV9 151 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 ZNF684Q5T5D7 378 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 CLEC9AQ6UXN8 241 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 THAP5Q7Z6K1 395 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 LHFPL3Q86UP9 236 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 CELF2-AS1Q8N7Q2 184 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 SEMA6DQ8NFY4 1073 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 TFAP2CQ92754 450 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 FAM71F1Q96KD3 344 aaPredicted RBP11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 LYZL4Q96KX0 146 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 ABCB9Q9NP78 766 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 G6PC2Q9NQR9 355 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 GPR84Q9NQS5 396 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 TMEM106BQ9NUM4 274 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 ACOXLQ9NUZ1 547 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 MRPS18AQ9NVS2 196 aaKnown RBP11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 C14orf119Q9NWQ9 140 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 CACNG2Q9Y698 323 aa11.87□□□□□ -0.51
GTF3C3-206ENST00000448539 IGHV4-61A0A0C4DH41 118 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 IGHV3-64DA0A0J9YX35 117 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 A0A1B0GWJ7 208 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 LRRC30A6NM36 301 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 ANXA2P2A6NMY6 339 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 J3QLW9 94 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 FAM20BO75063 409 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 SRSF10O75494 262 aaKnown RBP11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 TTRP02766 147 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 GNAO1P09471 354 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 IRF2P14316 349 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 ZNF19P17023 458 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 CD200P41217 278 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 HSPA13P48723 471 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 MVKQ03426 396 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 GALEQ14376 348 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 KRTAP21-3Q3LHN1 58 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 CDONQ4KMG0 1287 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 C6orf52Q5T4I8 152 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 MOGAT3Q86VF5 341 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 ELMOD2Q8IZ81 293 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 OR52I1Q8NGK6 324 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 PIGCQ92535 297 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 ERGIC1Q969X5 290 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 PPP1R14AQ96A00 147 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 C4orf36Q96KX1 117 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 HIST1H2AAQ96QV6 131 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 SMR3AQ99954 134 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 ALG8Q9BVK2 526 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 NARFLQ9H6Q4 476 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 GCM1Q9NP62 436 aa11.86□□□□□ -0.51
GTF3C3-206ENST00000448539 CHCHD3Q9NX63 227 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms