RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 JAM3Q9BX67 310 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 HDHD2Q9H0R4 259 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 OR51B6Q9H340 312 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 LPAR2Q9HBW0 351 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 DECR2Q9NUI1 292 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 DDX28Q9NUL7 540 aaKnown RBP11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 PCDHB10Q9UN67 800 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 PCDHGB1Q9Y5G3 927 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 TMEM14AQ9Y6G1 99 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 F5H5K5 113 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 J3QLW9 94 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 RPP14O95059 124 aaKnown RBP11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 PNPP00491 289 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 H2BFMP0C1H6 154 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF19P17023 458 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 MYL12AP19105 171 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 STOMP27105 288 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 APLNRP35414 380 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 MAGEB1P43366 347 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 COMPP49747 757 aaPredicted RBP11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 GABARAPL2P60520 117 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 CCL8P80075 99 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 MFGE8Q08431 387 aaPredicted RBP11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 GALEQ14376 348 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 IRF3Q14653 427 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 ALKBH6Q3KRA9 238 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 KCTD21Q4G0X4 260 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 CDONQ4KMG0 1287 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 XAF1Q6GPH4 301 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 C1orf174Q8IYL3 243 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 YIPF7Q8N8F6 280 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 SEMA6DQ8NFY4 1073 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 FAM216AQ8WUB2 273 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 ASB17Q8WXJ9 295 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 PPP1R14AQ96A00 147 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 POM121L2Q96KW2 1035 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 MNTQ99583 582 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 COQ7Q99807 217 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 YTHDF1Q9BYJ9 559 aaKnown RBP11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF665Q9H7R5 613 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 ACOXLQ9NUZ1 547 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 GNG8Q9UK08 70 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 BLOC1S6Q9UL45 172 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 EXOSC1Q9Y3B2 195 aaKnown RBP11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 N6AMT1Q9Y5N5 214 aa11.66□□□□□ -0.54
PDLIM2-213ENST00000448520 IGHV1-69-2A0A0G2JMI3 117 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 C5orf49A4QMS7 147 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 E9PI62 339 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 TRIM77I1YAP6 450 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 J3QLI3 93 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 PHYHO14832 338 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 CDC14BO60729 498 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 LALBAP00709 142 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 IGHV3-13P01766 116 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 RPSAP08865 295 aaKnown RBP11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 GATA3P23771 443 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 WNT5AP41221 380 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 CX3CR1P49238 355 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 GDI2P50395 445 aaKnown RBP11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 ROM1Q03395 351 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 EGR3Q06889 387 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 HFEQ30201 348 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 KRTAP27-1Q3LI81 207 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 GATAD2BQ8WXI9 593 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 RAB1CQ92928 201 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 TIMD4Q96H15 378 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 OR5M11Q96RB7 305 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 KCNJ15Q99712 375 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 WACQ9BTA9 647 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 CDCA4Q9BXL8 241 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 INPP5EQ9NRR6 644 aa11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 EIF3KQ9UBQ5 218 aaKnown RBP11.65□□□□□ -0.54
PDLIM2-213ENST00000448520 A0A0G2JMP0 313 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 A0A0X1KG70 313 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 TMEM89A2RUT3 159 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 METTL15A6NJ78 407 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 CLDN25C9JDP6 229 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 TPD52L2O43399 206 aaKnown RBP11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 SRSF10O75494 262 aaKnown RBP11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 TNFAIP8O95379 198 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 KRT8P05787 483 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ACSM4P0C7M7 580 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 SMIM18P0DKX4 95 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 COX5BP10606 129 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 EPHA1P21709 976 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 HSD11B1P28845 292 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 LIPAP38571 399 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 SLC6A9P48067 706 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 GTF2A1P52655 376 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF121P58317 390 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 HILS1P60008 231 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ACTG1P63261 375 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 SLC3A1Q07837 685 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 KCTD18Q6PI47 426 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF773Q6PK81 442 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms